Hb_103255_010

Information

Type -
Description -
Location Contig103255: 3-1035
Sequence    

Annotation

kegg
ID rcu:RCOM_0766910
description (R)-limonene synthase (EC:4.2.3.20)
nr
ID XP_012075360.1
description PREDICTED: terpene synthase 10-like [Jatropha curcas]
swissprot
ID B9T536
description Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1
trembl
ID A0A067KK14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=4 SV=1
Gene Ontology
ID GO:0000287
description terpene synthase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103255_010 0.0 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
2 Hb_000388_020 0.0631723493 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
3 Hb_072695_010 0.078777093 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
4 Hb_000959_380 0.0799329731 - - PREDICTED: (-)-alpha-terpineol synthase-like [Vitis vinifera]
5 Hb_006302_050 0.0805413409 - - PREDICTED: uncharacterized protein LOC104804969, partial [Tarenaya hassleriana]
6 Hb_003144_020 0.0826791796 - - (R)-limonene synthase, putative [Ricinus communis]
7 Hb_106850_010 0.0835857524 - - photosystem II protein D2 [Lactuca sativa]
8 Hb_104509_010 0.0842880587 - - photosystem II CP43 chlorophyll apoprotein (chloroplast) [Ficus sp. Moore 315]
9 Hb_154980_010 0.0854776968 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
10 Hb_000326_100 0.0864428686 transcription factor TF Family: MYB-related DnaJ homolog subfamily C member 2 [Morus notabilis]
11 Hb_054839_010 0.0870266212 - - PsbC, partial (chloroplast) [Asimina parviflora]
12 Hb_007645_040 0.0878888892 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]
13 Hb_131816_010 0.0898811766 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
14 Hb_007044_030 0.0905999034 - - Os06g0273400 [Oryza sativa Japonica Group]
15 Hb_005087_020 0.0923288836 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
16 Hb_003963_030 0.09521152 - - psbB [Jatropha curcas]
17 Hb_002835_420 0.095919751 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
18 Hb_001790_110 0.0975106854 - - unknown [Populus trichocarpa]
19 Hb_126973_010 0.1003188631 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Vitis vinifera]
20 Hb_005914_030 0.1032864178 - - -

Gene co-expression network

sample Hb_103255_010 Hb_103255_010 Hb_000388_020 Hb_000388_020 Hb_103255_010--Hb_000388_020 Hb_072695_010 Hb_072695_010 Hb_103255_010--Hb_072695_010 Hb_000959_380 Hb_000959_380 Hb_103255_010--Hb_000959_380 Hb_006302_050 Hb_006302_050 Hb_103255_010--Hb_006302_050 Hb_003144_020 Hb_003144_020 Hb_103255_010--Hb_003144_020 Hb_106850_010 Hb_106850_010 Hb_103255_010--Hb_106850_010 Hb_054839_010 Hb_054839_010 Hb_000388_020--Hb_054839_010 Hb_000388_020--Hb_006302_050 Hb_007645_040 Hb_007645_040 Hb_000388_020--Hb_007645_040 Hb_104509_010 Hb_104509_010 Hb_000388_020--Hb_104509_010 Hb_000388_020--Hb_106850_010 Hb_125153_010 Hb_125153_010 Hb_072695_010--Hb_125153_010 Hb_001790_110 Hb_001790_110 Hb_072695_010--Hb_001790_110 Hb_072695_010--Hb_000959_380 Hb_151061_040 Hb_151061_040 Hb_072695_010--Hb_151061_040 Hb_072695_010--Hb_000388_020 Hb_072695_010--Hb_054839_010 Hb_000959_380--Hb_003144_020 Hb_131816_010 Hb_131816_010 Hb_000959_380--Hb_131816_010 Hb_005914_030 Hb_005914_030 Hb_000959_380--Hb_005914_030 Hb_000959_380--Hb_104509_010 Hb_000326_100 Hb_000326_100 Hb_000959_380--Hb_000326_100 Hb_005224_020 Hb_005224_020 Hb_000959_380--Hb_005224_020 Hb_006302_050--Hb_104509_010 Hb_006302_050--Hb_106850_010 Hb_006302_050--Hb_005914_030 Hb_006302_050--Hb_003144_020 Hb_006302_050--Hb_131816_010 Hb_006302_050--Hb_000959_380 Hb_003144_020--Hb_104509_010 Hb_003144_020--Hb_005224_020 Hb_003144_020--Hb_000326_100 Hb_003144_020--Hb_005914_030 Hb_154980_010 Hb_154980_010 Hb_106850_010--Hb_154980_010 Hb_002835_420 Hb_002835_420 Hb_106850_010--Hb_002835_420 Hb_106850_010--Hb_104509_010 Hb_126973_010 Hb_126973_010 Hb_106850_010--Hb_126973_010 Hb_106850_010--Hb_003144_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.606564 5.67932 9.17241 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.97221 1.59204 0 0.75036 483.903

CAGE analysis