Hb_131816_010

Information

Type -
Description -
Location Contig131816: 1863-2948
Sequence    

Annotation

kegg
ID pxb:103929712
description subtilisin-like protease
nr
ID XP_012078825.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067K8J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13357 PE=4 SV=1
Gene Ontology
ID GO:0005618
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131816_010 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_000959_380 0.0408320049 - - PREDICTED: (-)-alpha-terpineol synthase-like [Vitis vinifera]
3 Hb_104509_010 0.0420101456 - - photosystem II CP43 chlorophyll apoprotein (chloroplast) [Ficus sp. Moore 315]
4 Hb_006302_050 0.0447963887 - - PREDICTED: uncharacterized protein LOC104804969, partial [Tarenaya hassleriana]
5 Hb_003144_020 0.0466905515 - - (R)-limonene synthase, putative [Ricinus communis]
6 Hb_005224_020 0.0553366737 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
7 Hb_005914_030 0.0587983039 - - -
8 Hb_000326_100 0.0613026558 transcription factor TF Family: MYB-related DnaJ homolog subfamily C member 2 [Morus notabilis]
9 Hb_106850_010 0.0618867868 - - photosystem II protein D2 [Lactuca sativa]
10 Hb_002835_420 0.0630513419 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
11 Hb_154980_010 0.0633621668 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
12 Hb_010053_060 0.0687604427 - - ATP-binding cassette transporter, putative [Ricinus communis]
13 Hb_010172_020 0.0697923595 - - PREDICTED: tyrosine/DOPA decarboxylase 1-like [Jatropha curcas]
14 Hb_010053_050 0.0789641634 - - hypothetical protein POPTR_0530s002102g, partial [Populus trichocarpa]
15 Hb_005622_090 0.0804131311 - - hypothetical protein CICLE_v10027074mg [Citrus clementina]
16 Hb_002395_010 0.0813210664 - - -
17 Hb_000388_020 0.0830012504 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
18 Hb_012184_020 0.0832662786 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004208_040 0.0834981768 - - UDP-glycosyltransferase 86A1 [Morus notabilis]
20 Hb_126973_010 0.0840077243 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Vitis vinifera]

Gene co-expression network

sample Hb_131816_010 Hb_131816_010 Hb_000959_380 Hb_000959_380 Hb_131816_010--Hb_000959_380 Hb_104509_010 Hb_104509_010 Hb_131816_010--Hb_104509_010 Hb_006302_050 Hb_006302_050 Hb_131816_010--Hb_006302_050 Hb_003144_020 Hb_003144_020 Hb_131816_010--Hb_003144_020 Hb_005224_020 Hb_005224_020 Hb_131816_010--Hb_005224_020 Hb_005914_030 Hb_005914_030 Hb_131816_010--Hb_005914_030 Hb_000959_380--Hb_003144_020 Hb_000959_380--Hb_005914_030 Hb_000959_380--Hb_104509_010 Hb_000326_100 Hb_000326_100 Hb_000959_380--Hb_000326_100 Hb_000959_380--Hb_005224_020 Hb_104509_010--Hb_006302_050 Hb_106850_010 Hb_106850_010 Hb_104509_010--Hb_106850_010 Hb_104509_010--Hb_003144_020 Hb_104509_010--Hb_005914_030 Hb_104509_010--Hb_005224_020 Hb_006302_050--Hb_106850_010 Hb_006302_050--Hb_005914_030 Hb_006302_050--Hb_003144_020 Hb_006302_050--Hb_000959_380 Hb_003144_020--Hb_005224_020 Hb_003144_020--Hb_000326_100 Hb_003144_020--Hb_005914_030 Hb_005224_020--Hb_005914_030 Hb_005224_020--Hb_006302_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0967931 0.321042 0.146485 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.086708 29.775

CAGE analysis