Hb_091140_020

Information

Type -
Description -
Location Contig91140: 20288-20629
Sequence    

Annotation

kegg
ID pop:POPTR_0002s22060g
description POPTRDRAFT_645017; hypothetical protein
nr
ID XP_012080701.1
description PREDICTED: uncharacterized protein LOC105640903 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KF26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091140_020 0.0 - - PREDICTED: uncharacterized protein LOC105640903 [Jatropha curcas]
2 Hb_027746_030 0.0984048848 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000201_050 0.1202699815 - - -
4 Hb_001584_250 0.1393051307 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
5 Hb_005695_050 0.1474081917 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
6 Hb_008200_010 0.1488280503 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
7 Hb_000227_350 0.1534616092 - - hypothetical protein CICLE_v10006537mg [Citrus clementina]
8 Hb_003711_050 0.1542860603 - - Isoflavone reductase, putative [Ricinus communis]
9 Hb_002053_020 0.1553408827 - - PREDICTED: MATE efflux family protein DTX1 [Jatropha curcas]
10 Hb_032260_040 0.1563632346 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009851_120 0.1574495882 - - PREDICTED: RING-H2 zinc finger protein RHA4a [Jatropha curcas]
12 Hb_000245_070 0.1575107429 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
13 Hb_001502_010 0.1586161427 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
14 Hb_000429_080 0.1606277584 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012217_010 0.1614044836 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Jatropha curcas]
16 Hb_074100_010 0.1620130305 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
17 Hb_008566_070 0.1624149923 - - conserved hypothetical protein [Ricinus communis]
18 Hb_032299_020 0.162922056 - - tonoplast intrinsic protein, putative [Ricinus communis]
19 Hb_000007_020 0.1652989147 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
20 Hb_006187_020 0.1667071103 - - PREDICTED: WAT1-related protein At5g07050-like [Populus euphratica]

Gene co-expression network

sample Hb_091140_020 Hb_091140_020 Hb_027746_030 Hb_027746_030 Hb_091140_020--Hb_027746_030 Hb_000201_050 Hb_000201_050 Hb_091140_020--Hb_000201_050 Hb_001584_250 Hb_001584_250 Hb_091140_020--Hb_001584_250 Hb_005695_050 Hb_005695_050 Hb_091140_020--Hb_005695_050 Hb_008200_010 Hb_008200_010 Hb_091140_020--Hb_008200_010 Hb_000227_350 Hb_000227_350 Hb_091140_020--Hb_000227_350 Hb_027746_030--Hb_000201_050 Hb_003711_050 Hb_003711_050 Hb_027746_030--Hb_003711_050 Hb_002186_170 Hb_002186_170 Hb_027746_030--Hb_002186_170 Hb_032260_040 Hb_032260_040 Hb_027746_030--Hb_032260_040 Hb_012217_010 Hb_012217_010 Hb_027746_030--Hb_012217_010 Hb_000201_050--Hb_003711_050 Hb_000201_050--Hb_032260_040 Hb_000201_050--Hb_001584_250 Hb_001502_010 Hb_001502_010 Hb_000201_050--Hb_001502_010 Hb_000422_060 Hb_000422_060 Hb_000201_050--Hb_000422_060 Hb_032299_020 Hb_032299_020 Hb_001584_250--Hb_032299_020 Hb_000429_080 Hb_000429_080 Hb_001584_250--Hb_000429_080 Hb_000438_180 Hb_000438_180 Hb_001584_250--Hb_000438_180 Hb_009851_120 Hb_009851_120 Hb_001584_250--Hb_009851_120 Hb_000007_020 Hb_000007_020 Hb_001584_250--Hb_000007_020 Hb_005695_050--Hb_008200_010 Hb_006187_020 Hb_006187_020 Hb_005695_050--Hb_006187_020 Hb_002374_070 Hb_002374_070 Hb_005695_050--Hb_002374_070 Hb_001766_140 Hb_001766_140 Hb_005695_050--Hb_001766_140 Hb_027402_110 Hb_027402_110 Hb_005695_050--Hb_027402_110 Hb_023536_020 Hb_023536_020 Hb_005695_050--Hb_023536_020 Hb_008200_010--Hb_001502_010 Hb_006590_040 Hb_006590_040 Hb_008200_010--Hb_006590_040 Hb_008200_010--Hb_002374_070 Hb_008200_010--Hb_027402_110 Hb_008200_010--Hb_000007_020 Hb_000227_350--Hb_000201_050 Hb_008566_070 Hb_008566_070 Hb_000227_350--Hb_008566_070 Hb_002170_010 Hb_002170_010 Hb_000227_350--Hb_002170_010 Hb_000227_350--Hb_002186_170 Hb_128216_010 Hb_128216_010 Hb_000227_350--Hb_128216_010 Hb_080601_010 Hb_080601_010 Hb_000227_350--Hb_080601_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.64678 0.666503 9.43851 0 0.512948
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.714096

CAGE analysis