Hb_001766_140

Information

Type -
Description -
Location Contig1766: 131403-133298
Sequence    

Annotation

kegg
ID pop:POPTR_0007s05100g
description POPTRDRAFT_654740; Peroxidase 17 precursor family protein
nr
ID KDP29721.1
description hypothetical protein JCGZ_18656 [Jatropha curcas]
swissprot
ID Q9SJZ2
description Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1
trembl
ID A0A067K0K6
description Peroxidase OS=Jatropha curcas GN=JCGZ_18656 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 17-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16939: 131513-133264
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001766_140 0.0 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
2 Hb_006187_020 0.0512633281 - - PREDICTED: WAT1-related protein At5g07050-like [Populus euphratica]
3 Hb_027402_110 0.0779998359 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
4 Hb_005695_050 0.0951108428 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
5 Hb_004157_060 0.098452302 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Jatropha curcas]
6 Hb_000429_080 0.1071817259 - - conserved hypothetical protein [Ricinus communis]
7 Hb_008200_010 0.1085576412 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
8 Hb_003442_020 0.1118041803 - - ccd1, putative [Ricinus communis]
9 Hb_003337_010 0.1152965334 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001502_010 0.1170379467 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
11 Hb_000579_210 0.1174348919 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
12 Hb_001948_100 0.1180559008 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000152_090 0.1186235372 - - unnamed protein product [Coffea canephora]
14 Hb_123887_010 0.1224281493 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
15 Hb_001675_260 0.1224725276 - - nitrate transporter, putative [Ricinus communis]
16 Hb_103000_010 0.1227346222 - - hypothetical protein POPTR_0007s02210g [Populus trichocarpa]
17 Hb_010261_050 0.1235157458 - - DNA binding protein, putative [Ricinus communis]
18 Hb_001104_250 0.1246845602 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
19 Hb_004652_040 0.125334745 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_002014_120 0.1275639633 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]

Gene co-expression network

sample Hb_001766_140 Hb_001766_140 Hb_006187_020 Hb_006187_020 Hb_001766_140--Hb_006187_020 Hb_027402_110 Hb_027402_110 Hb_001766_140--Hb_027402_110 Hb_005695_050 Hb_005695_050 Hb_001766_140--Hb_005695_050 Hb_004157_060 Hb_004157_060 Hb_001766_140--Hb_004157_060 Hb_000429_080 Hb_000429_080 Hb_001766_140--Hb_000429_080 Hb_008200_010 Hb_008200_010 Hb_001766_140--Hb_008200_010 Hb_006187_020--Hb_005695_050 Hb_006187_020--Hb_000429_080 Hb_006187_020--Hb_027402_110 Hb_003442_020 Hb_003442_020 Hb_006187_020--Hb_003442_020 Hb_006187_020--Hb_004157_060 Hb_001675_260 Hb_001675_260 Hb_027402_110--Hb_001675_260 Hb_027402_110--Hb_008200_010 Hb_001502_010 Hb_001502_010 Hb_027402_110--Hb_001502_010 Hb_001255_030 Hb_001255_030 Hb_027402_110--Hb_001255_030 Hb_027402_110--Hb_005695_050 Hb_005695_050--Hb_008200_010 Hb_002374_070 Hb_002374_070 Hb_005695_050--Hb_002374_070 Hb_023536_020 Hb_023536_020 Hb_005695_050--Hb_023536_020 Hb_004157_060--Hb_001675_260 Hb_004157_060--Hb_027402_110 Hb_000021_010 Hb_000021_010 Hb_004157_060--Hb_000021_010 Hb_001318_180 Hb_001318_180 Hb_004157_060--Hb_001318_180 Hb_001584_250 Hb_001584_250 Hb_000429_080--Hb_001584_250 Hb_032299_020 Hb_032299_020 Hb_000429_080--Hb_032299_020 Hb_009851_120 Hb_009851_120 Hb_000429_080--Hb_009851_120 Hb_000429_080--Hb_001502_010 Hb_000999_060 Hb_000999_060 Hb_000429_080--Hb_000999_060 Hb_008200_010--Hb_001502_010 Hb_006590_040 Hb_006590_040 Hb_008200_010--Hb_006590_040 Hb_008200_010--Hb_002374_070 Hb_000007_020 Hb_000007_020 Hb_008200_010--Hb_000007_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.15775 1.92119 15.7448 0 0.0140824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0365934 0.0287867 0 0.0230282 0.418947

CAGE analysis