Hb_071126_010

Information

Type -
Description -
Location Contig71126: 3-644
Sequence    

Annotation

kegg
ID rcu:RCOM_0733220
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.30)
nr
ID XP_002520524.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q9M345
description L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1
trembl
ID B9S3F5
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_0733220 PE=3 SV=1
Gene Ontology
ID GO:0004672
description concanavalin a-like lectin protein kinase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_071126_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_017043_030 0.1637544623 - - hypothetical protein CISIN_1g011604mg [Citrus sinensis]
3 Hb_000186_110 0.1661681034 - - hypothetical protein CISIN_1g020639mg [Citrus sinensis]
4 Hb_003861_150 0.1679386849 - - hypothetical protein JCGZ_15167 [Jatropha curcas]
5 Hb_011649_010 0.1809425999 transcription factor TF Family: Pseudo ARR-B sensory transduction histidine kinase, putative [Ricinus communis]
6 Hb_072212_010 0.1814543164 - - hypothetical chloroplast RF1 [Ficus sp. M. J. Moore 315]
7 Hb_000118_090 0.1866482246 - - Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus communis]
8 Hb_002835_090 0.1870778193 - - RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu; Flags: Precursor [Glycine max]
9 Hb_003602_030 0.1927719182 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
10 Hb_007504_040 0.1958470811 - - hypothetical chloroplast RF2 [Fragaria iinumae]
11 Hb_001377_060 0.2026140765 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Jatropha curcas]
12 Hb_007504_030 0.2044603846 - - Rpl14, partial (chloroplast) [Schistostemon retusum]
13 Hb_001338_160 0.2048508578 - - NADH dehydrogenase subunit 5 [Hevea brasiliensis]
14 Hb_001155_020 0.2050089463 - - Leucine-rich repeat protein kinase family protein isoform 2 [Theobroma cacao]
15 Hb_162094_010 0.2068287421 - - RNA polymerase alpha subunit [Hevea brasiliensis]
16 Hb_000062_480 0.2074253667 - - PREDICTED: 4-coumarate--CoA ligase-like 9 isoform X1 [Jatropha curcas]
17 Hb_137600_010 0.2092984378 - - 50S ribosomal protein L1p, putative [Ricinus communis]
18 Hb_004611_040 0.2106002245 - - PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000254_120 0.211488653 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000130_330 0.211951968 transcription factor TF Family: TCP PREDICTED: transcription factor TCP3-like [Jatropha curcas]

Gene co-expression network

sample Hb_071126_010 Hb_071126_010 Hb_017043_030 Hb_017043_030 Hb_071126_010--Hb_017043_030 Hb_000186_110 Hb_000186_110 Hb_071126_010--Hb_000186_110 Hb_003861_150 Hb_003861_150 Hb_071126_010--Hb_003861_150 Hb_011649_010 Hb_011649_010 Hb_071126_010--Hb_011649_010 Hb_072212_010 Hb_072212_010 Hb_071126_010--Hb_072212_010 Hb_000118_090 Hb_000118_090 Hb_071126_010--Hb_000118_090 Hb_017043_030--Hb_072212_010 Hb_005288_180 Hb_005288_180 Hb_017043_030--Hb_005288_180 Hb_004324_120 Hb_004324_120 Hb_017043_030--Hb_004324_120 Hb_137600_010 Hb_137600_010 Hb_017043_030--Hb_137600_010 Hb_000069_500 Hb_000069_500 Hb_017043_030--Hb_000069_500 Hb_000186_110--Hb_000118_090 Hb_000062_480 Hb_000062_480 Hb_000186_110--Hb_000062_480 Hb_000130_330 Hb_000130_330 Hb_000186_110--Hb_000130_330 Hb_000175_640 Hb_000175_640 Hb_000186_110--Hb_000175_640 Hb_004611_040 Hb_004611_040 Hb_000186_110--Hb_004611_040 Hb_007595_050 Hb_007595_050 Hb_003861_150--Hb_007595_050 Hb_005399_040 Hb_005399_040 Hb_003861_150--Hb_005399_040 Hb_001584_210 Hb_001584_210 Hb_003861_150--Hb_001584_210 Hb_000161_010 Hb_000161_010 Hb_003861_150--Hb_000161_010 Hb_005228_060 Hb_005228_060 Hb_003861_150--Hb_005228_060 Hb_002835_090 Hb_002835_090 Hb_003861_150--Hb_002835_090 Hb_011649_010--Hb_000118_090 Hb_010721_020 Hb_010721_020 Hb_011649_010--Hb_010721_020 Hb_000317_180 Hb_000317_180 Hb_011649_010--Hb_000317_180 Hb_000193_220 Hb_000193_220 Hb_011649_010--Hb_000193_220 Hb_071079_020 Hb_071079_020 Hb_011649_010--Hb_071079_020 Hb_000045_050 Hb_000045_050 Hb_011649_010--Hb_000045_050 Hb_001155_020 Hb_001155_020 Hb_072212_010--Hb_001155_020 Hb_000395_090 Hb_000395_090 Hb_072212_010--Hb_000395_090 Hb_000053_120 Hb_000053_120 Hb_072212_010--Hb_000053_120 Hb_072212_010--Hb_004611_040 Hb_001338_160 Hb_001338_160 Hb_072212_010--Hb_001338_160 Hb_000118_090--Hb_010721_020 Hb_000118_090--Hb_000193_220 Hb_000118_090--Hb_000045_050 Hb_000118_090--Hb_071079_020 Hb_000544_080 Hb_000544_080 Hb_000118_090--Hb_000544_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.557641 0.482061 3.01003 0.701088 0.961229 0.451756
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.12691 0.0587345 6.04317

CAGE analysis