Hb_057638_010

Information

Type -
Description -
Location Contig57638: 27-617
Sequence    

Annotation

kegg
ID tcc:TCM_018339
description hypothetical protein
nr
ID XP_012075797.1
description PREDICTED: uncharacterized protein LOC105637008 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061EG48
description Uncharacterized protein OS=Theobroma cacao GN=TCM_018339 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057638_010 0.0 - - PREDICTED: uncharacterized protein LOC105637008 [Jatropha curcas]
2 Hb_000920_070 0.2091197983 - - -
3 Hb_128531_010 0.2114768149 - - phosphoprotein phosphatase, putative [Ricinus communis]
4 Hb_095835_010 0.2152747202 - - hypothetical protein JCGZ_23410 [Jatropha curcas]
5 Hb_010810_070 0.2221117487 - - serine/threonine kinase, putative [Ricinus communis]
6 Hb_009848_060 0.2303102991 - - unknown [Glycine max]
7 Hb_014324_010 0.2376107986 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
8 Hb_154726_010 0.2435610033 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
9 Hb_009848_050 0.2451768412 - - PREDICTED: proline-rich receptor-like protein kinase PERK13 [Elaeis guineensis]
10 Hb_001085_210 0.2562000608 - - PREDICTED: myosin-binding protein 3 [Jatropha curcas]
11 Hb_004052_060 0.2573658597 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
12 Hb_069147_010 0.2587010659 desease resistance Gene Name: zf-BED PREDICTED: probable disease resistance protein At4g27220 isoform X1 [Populus euphratica]
13 Hb_087161_010 0.2608804796 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_185058_020 0.2608808718 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
15 Hb_155556_010 0.2630229571 - - putative methylenetetrahydrofolate reductase [Morus notabilis]
16 Hb_188487_010 0.2667223636 - - hypothetical protein JCGZ_24382 [Jatropha curcas]
17 Hb_142570_010 0.2692971338 - - PREDICTED: uncharacterized protein LOC104907573 [Beta vulgaris subsp. vulgaris]
18 Hb_001880_020 0.2696996473 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
19 Hb_010129_020 0.2720289299 - - cytochrome P450, putative [Ricinus communis]
20 Hb_030885_010 0.2754882689 - - -

Gene co-expression network

sample Hb_057638_010 Hb_057638_010 Hb_000920_070 Hb_000920_070 Hb_057638_010--Hb_000920_070 Hb_128531_010 Hb_128531_010 Hb_057638_010--Hb_128531_010 Hb_095835_010 Hb_095835_010 Hb_057638_010--Hb_095835_010 Hb_010810_070 Hb_010810_070 Hb_057638_010--Hb_010810_070 Hb_009848_060 Hb_009848_060 Hb_057638_010--Hb_009848_060 Hb_014324_010 Hb_014324_010 Hb_057638_010--Hb_014324_010 Hb_155556_010 Hb_155556_010 Hb_000920_070--Hb_155556_010 Hb_001780_010 Hb_001780_010 Hb_000920_070--Hb_001780_010 Hb_000920_070--Hb_010810_070 Hb_001524_020 Hb_001524_020 Hb_000920_070--Hb_001524_020 Hb_000920_070--Hb_095835_010 Hb_128531_010--Hb_095835_010 Hb_043792_020 Hb_043792_020 Hb_128531_010--Hb_043792_020 Hb_005439_010 Hb_005439_010 Hb_128531_010--Hb_005439_010 Hb_159938_010 Hb_159938_010 Hb_128531_010--Hb_159938_010 Hb_004129_180 Hb_004129_180 Hb_128531_010--Hb_004129_180 Hb_004052_060 Hb_004052_060 Hb_095835_010--Hb_004052_060 Hb_095835_010--Hb_010810_070 Hb_095835_010--Hb_155556_010 Hb_095835_010--Hb_005439_010 Hb_003376_280 Hb_003376_280 Hb_010810_070--Hb_003376_280 Hb_003780_010 Hb_003780_010 Hb_010810_070--Hb_003780_010 Hb_000190_130 Hb_000190_130 Hb_010810_070--Hb_000190_130 Hb_093039_010 Hb_093039_010 Hb_010810_070--Hb_093039_010 Hb_000574_490 Hb_000574_490 Hb_010810_070--Hb_000574_490 Hb_000260_730 Hb_000260_730 Hb_009848_060--Hb_000260_730 Hb_002016_130 Hb_002016_130 Hb_009848_060--Hb_002016_130 Hb_030885_010 Hb_030885_010 Hb_009848_060--Hb_030885_010 Hb_009848_060--Hb_004052_060 Hb_009848_050 Hb_009848_050 Hb_009848_060--Hb_009848_050 Hb_000574_030 Hb_000574_030 Hb_009848_060--Hb_000574_030 Hb_001096_020 Hb_001096_020 Hb_014324_010--Hb_001096_020 Hb_014324_010--Hb_009848_050 Hb_049365_010 Hb_049365_010 Hb_014324_010--Hb_049365_010 Hb_008033_060 Hb_008033_060 Hb_014324_010--Hb_008033_060 Hb_097021_010 Hb_097021_010 Hb_014324_010--Hb_097021_010 Hb_142570_010 Hb_142570_010 Hb_014324_010--Hb_142570_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.123632 0.150349 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112709 0 0.306274 1.31371 1.69281

CAGE analysis