Hb_128531_010

Information

Type -
Description -
Location Contig128531: 162-4172
Sequence    

Annotation

kegg
ID rcu:RCOM_1429720
description phosphoprotein phosphatase, putative (EC:3.1.3.16)
nr
ID XP_002512305.1
description phosphoprotein phosphatase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9REY6
description Phosphoprotein phosphatase, putative OS=Ricinus communis GN=RCOM_1429720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128531_010 0.0 - - phosphoprotein phosphatase, putative [Ricinus communis]
2 Hb_095835_010 0.1077648184 - - hypothetical protein JCGZ_23410 [Jatropha curcas]
3 Hb_043792_020 0.1692407922 - - Retrotransposon gag protein [Medicago truncatula]
4 Hb_005439_010 0.1817291085 - - PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris subsp. vulgaris]
5 Hb_159938_010 0.1853097272 - - phosphoprotein phosphatase, putative [Ricinus communis]
6 Hb_057638_010 0.2114768149 - - PREDICTED: uncharacterized protein LOC105637008 [Jatropha curcas]
7 Hb_004129_180 0.2139754546 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
8 Hb_004052_060 0.2145080336 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
9 Hb_087161_010 0.2189084561 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_188163_010 0.219229917 - - hypothetical protein CISIN_1g048732mg [Citrus sinensis]
11 Hb_010810_070 0.2240261791 - - serine/threonine kinase, putative [Ricinus communis]
12 Hb_001519_210 0.2265337647 - - hypothetical protein B456_003G032500 [Gossypium raimondii]
13 Hb_000920_070 0.2291177841 - - -
14 Hb_155556_010 0.2307600923 - - putative methylenetetrahydrofolate reductase [Morus notabilis]
15 Hb_010129_020 0.2366932555 - - cytochrome P450, putative [Ricinus communis]
16 Hb_142570_010 0.2430229398 - - PREDICTED: uncharacterized protein LOC104907573 [Beta vulgaris subsp. vulgaris]
17 Hb_109791_010 0.2462927827 - - -
18 Hb_000175_310 0.2463380316 - - polyprotein [Citrus endogenous pararetrovirus]
19 Hb_000684_460 0.2463789228 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
20 Hb_115868_030 0.2464037901 - - Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial -like protein [Gossypium arboreum]

Gene co-expression network

sample Hb_128531_010 Hb_128531_010 Hb_095835_010 Hb_095835_010 Hb_128531_010--Hb_095835_010 Hb_043792_020 Hb_043792_020 Hb_128531_010--Hb_043792_020 Hb_005439_010 Hb_005439_010 Hb_128531_010--Hb_005439_010 Hb_159938_010 Hb_159938_010 Hb_128531_010--Hb_159938_010 Hb_057638_010 Hb_057638_010 Hb_128531_010--Hb_057638_010 Hb_004129_180 Hb_004129_180 Hb_128531_010--Hb_004129_180 Hb_004052_060 Hb_004052_060 Hb_095835_010--Hb_004052_060 Hb_010810_070 Hb_010810_070 Hb_095835_010--Hb_010810_070 Hb_000920_070 Hb_000920_070 Hb_095835_010--Hb_000920_070 Hb_155556_010 Hb_155556_010 Hb_095835_010--Hb_155556_010 Hb_095835_010--Hb_005439_010 Hb_001519_210 Hb_001519_210 Hb_043792_020--Hb_001519_210 Hb_043792_020--Hb_159938_010 Hb_043792_020--Hb_005439_010 Hb_154997_010 Hb_154997_010 Hb_043792_020--Hb_154997_010 Hb_050334_010 Hb_050334_010 Hb_043792_020--Hb_050334_010 Hb_005439_010--Hb_001519_210 Hb_005439_010--Hb_159938_010 Hb_005439_010--Hb_155556_010 Hb_002473_140 Hb_002473_140 Hb_159938_010--Hb_002473_140 Hb_159938_010--Hb_154997_010 Hb_002869_070 Hb_002869_070 Hb_159938_010--Hb_002869_070 Hb_159938_010--Hb_001519_210 Hb_088410_010 Hb_088410_010 Hb_159938_010--Hb_088410_010 Hb_057638_010--Hb_000920_070 Hb_057638_010--Hb_095835_010 Hb_057638_010--Hb_010810_070 Hb_009848_060 Hb_009848_060 Hb_057638_010--Hb_009848_060 Hb_014324_010 Hb_014324_010 Hb_057638_010--Hb_014324_010 Hb_188163_010 Hb_188163_010 Hb_004129_180--Hb_188163_010 Hb_010129_020 Hb_010129_020 Hb_004129_180--Hb_010129_020 Hb_067634_010 Hb_067634_010 Hb_004129_180--Hb_067634_010 Hb_000312_030 Hb_000312_030 Hb_004129_180--Hb_000312_030 Hb_115868_030 Hb_115868_030 Hb_004129_180--Hb_115868_030 Hb_153924_010 Hb_153924_010 Hb_004129_180--Hb_153924_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0490501 0 0.0106434 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.143963 0.50708 1.0427

CAGE analysis