Hb_039635_010

Information

Type -
Description -
Location Contig39635: 1040-4800
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID P0CT40
description Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039635_010 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_151978_010 0.148639512 - - -
3 Hb_000227_030 0.2377575906 - - -
4 Hb_179763_020 0.2943125207 - - -
5 Hb_036285_010 0.3024635443 - - -
6 Hb_002750_020 0.312489732 - - PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Jatropha curcas]
7 Hb_002641_110 0.3127918391 - - PREDICTED: uncharacterized protein LOC103448574 [Malus domestica]
8 Hb_163413_010 0.315348391 - - PREDICTED: uncharacterized protein LOC102604542 [Solanum tuberosum]
9 Hb_010803_010 0.3222253316 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
10 Hb_079993_010 0.3254779205 - - PREDICTED: uncharacterized protein LOC103336399 [Prunus mume]
11 Hb_000092_210 0.3413843555 - - -
12 Hb_023813_010 0.3427212211 - - PREDICTED: uncharacterized protein LOC105162193 [Sesamum indicum]
13 Hb_007426_240 0.3437263349 - - -
14 Hb_009722_020 0.3442145104 - - -
15 Hb_010588_010 0.3451259419 - - -
16 Hb_000529_120 0.3467410204 - - PREDICTED: uncharacterized protein LOC105641745 [Jatropha curcas]
17 Hb_123915_050 0.3481453353 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
18 Hb_002307_070 0.3486265738 - - hypothetical protein JCGZ_14841 [Jatropha curcas]
19 Hb_021888_110 0.355697838 - - -
20 Hb_174107_010 0.3575386905 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]

Gene co-expression network

sample Hb_039635_010 Hb_039635_010 Hb_151978_010 Hb_151978_010 Hb_039635_010--Hb_151978_010 Hb_000227_030 Hb_000227_030 Hb_039635_010--Hb_000227_030 Hb_179763_020 Hb_179763_020 Hb_039635_010--Hb_179763_020 Hb_036285_010 Hb_036285_010 Hb_039635_010--Hb_036285_010 Hb_002750_020 Hb_002750_020 Hb_039635_010--Hb_002750_020 Hb_002641_110 Hb_002641_110 Hb_039635_010--Hb_002641_110 Hb_151978_010--Hb_000227_030 Hb_151978_010--Hb_002750_020 Hb_151978_010--Hb_002641_110 Hb_010803_010 Hb_010803_010 Hb_151978_010--Hb_010803_010 Hb_168418_010 Hb_168418_010 Hb_151978_010--Hb_168418_010 Hb_000227_030--Hb_179763_020 Hb_079993_010 Hb_079993_010 Hb_000227_030--Hb_079993_010 Hb_163413_010 Hb_163413_010 Hb_000227_030--Hb_163413_010 Hb_000227_030--Hb_002641_110 Hb_123915_050 Hb_123915_050 Hb_179763_020--Hb_123915_050 Hb_002188_100 Hb_002188_100 Hb_179763_020--Hb_002188_100 Hb_000563_220 Hb_000563_220 Hb_179763_020--Hb_000563_220 Hb_000463_050 Hb_000463_050 Hb_179763_020--Hb_000463_050 Hb_002205_200 Hb_002205_200 Hb_036285_010--Hb_002205_200 Hb_010588_010 Hb_010588_010 Hb_036285_010--Hb_010588_010 Hb_174107_010 Hb_174107_010 Hb_036285_010--Hb_174107_010 Hb_166548_010 Hb_166548_010 Hb_036285_010--Hb_166548_010 Hb_001981_080 Hb_001981_080 Hb_036285_010--Hb_001981_080 Hb_021888_110 Hb_021888_110 Hb_036285_010--Hb_021888_110 Hb_002750_020--Hb_168418_010 Hb_010098_070 Hb_010098_070 Hb_002750_020--Hb_010098_070 Hb_001053_160 Hb_001053_160 Hb_002750_020--Hb_001053_160 Hb_004223_200 Hb_004223_200 Hb_002750_020--Hb_004223_200 Hb_002641_110--Hb_010803_010 Hb_028271_010 Hb_028271_010 Hb_002641_110--Hb_028271_010 Hb_014556_020 Hb_014556_020 Hb_002641_110--Hb_014556_020 Hb_001377_390 Hb_001377_390 Hb_002641_110--Hb_001377_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00760086 0 0 0 0 0.0142679
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0135731 0 0 0

CAGE analysis