Hb_029299_010

Information

Type -
Description -
Location Contig29299: 6793-10836
Sequence    

Annotation

kegg
ID cmo:103502718
description uncharacterized LOC103502718
nr
ID XP_012092566.1
description PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0NAW6
description Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like protein OS=Gossypium arboreum GN=F383_13104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029299_010 0.0 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
2 Hb_022500_010 0.1632068491 - - -
3 Hb_007713_010 0.2120596975 - - hypothetical protein JCGZ_18011 [Jatropha curcas]
4 Hb_039305_010 0.2220313855 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
5 Hb_002498_090 0.2231884217 - - -
6 Hb_003773_030 0.2453606169 - - -
7 Hb_012324_020 0.2502818172 - - -
8 Hb_094721_010 0.2510669385 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]
9 Hb_001504_320 0.255744921 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
10 Hb_000979_050 0.2643013925 - - -
11 Hb_001842_120 0.2805190591 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
12 Hb_003837_020 0.2833317188 - - PREDICTED: uncharacterized protein LOC103710465 isoform X1 [Phoenix dactylifera]
13 Hb_005408_040 0.2917333493 - - -
14 Hb_008092_140 0.2960704902 - - PREDICTED: uncharacterized protein LOC103636948 [Zea mays]
15 Hb_001007_050 0.3011401605 - - hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
16 Hb_145890_010 0.3030588537 - - unnamed protein product [Vitis vinifera]
17 Hb_007477_090 0.3076815255 - - PREDICTED: tetraspanin-18 [Jatropha curcas]
18 Hb_039548_010 0.3077634741 - - hypothetical protein RCOM_1685970 [Ricinus communis]
19 Hb_002903_010 0.3079195557 - - 60S ribosomal protein L37-3 [Morus notabilis]
20 Hb_000184_190 0.3079508208 - - hypothetical protein VITISV_016970 [Vitis vinifera]

Gene co-expression network

sample Hb_029299_010 Hb_029299_010 Hb_022500_010 Hb_022500_010 Hb_029299_010--Hb_022500_010 Hb_007713_010 Hb_007713_010 Hb_029299_010--Hb_007713_010 Hb_039305_010 Hb_039305_010 Hb_029299_010--Hb_039305_010 Hb_002498_090 Hb_002498_090 Hb_029299_010--Hb_002498_090 Hb_003773_030 Hb_003773_030 Hb_029299_010--Hb_003773_030 Hb_012324_020 Hb_012324_020 Hb_029299_010--Hb_012324_020 Hb_022500_010--Hb_007713_010 Hb_004116_110 Hb_004116_110 Hb_022500_010--Hb_004116_110 Hb_015401_010 Hb_015401_010 Hb_022500_010--Hb_015401_010 Hb_000367_170 Hb_000367_170 Hb_022500_010--Hb_000367_170 Hb_188382_010 Hb_188382_010 Hb_022500_010--Hb_188382_010 Hb_007713_010--Hb_003773_030 Hb_007477_090 Hb_007477_090 Hb_007713_010--Hb_007477_090 Hb_007713_010--Hb_039305_010 Hb_000979_050 Hb_000979_050 Hb_007713_010--Hb_000979_050 Hb_000067_020 Hb_000067_020 Hb_039305_010--Hb_000067_020 Hb_039305_010--Hb_000979_050 Hb_000736_010 Hb_000736_010 Hb_039305_010--Hb_000736_010 Hb_008092_140 Hb_008092_140 Hb_039305_010--Hb_008092_140 Hb_039305_010--Hb_003773_030 Hb_159085_010 Hb_159085_010 Hb_039305_010--Hb_159085_010 Hb_001998_060 Hb_001998_060 Hb_002498_090--Hb_001998_060 Hb_039112_010 Hb_039112_010 Hb_002498_090--Hb_039112_010 Hb_000869_110 Hb_000869_110 Hb_002498_090--Hb_000869_110 Hb_002392_050 Hb_002392_050 Hb_002498_090--Hb_002392_050 Hb_115720_010 Hb_115720_010 Hb_002498_090--Hb_115720_010 Hb_003773_030--Hb_159085_010 Hb_001504_320 Hb_001504_320 Hb_003773_030--Hb_001504_320 Hb_003773_030--Hb_000067_020 Hb_003773_030--Hb_000979_050 Hb_094721_010 Hb_094721_010 Hb_012324_020--Hb_094721_010 Hb_000003_770 Hb_000003_770 Hb_012324_020--Hb_000003_770 Hb_088496_010 Hb_088496_010 Hb_012324_020--Hb_088496_010 Hb_001379_130 Hb_001379_130 Hb_012324_020--Hb_001379_130 Hb_004297_030 Hb_004297_030 Hb_012324_020--Hb_004297_030 Hb_005408_040 Hb_005408_040 Hb_012324_020--Hb_005408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0210763 0.0249513
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0515101 0.162048 0 0 0

CAGE analysis