Hb_007713_010

Information

Type -
Description -
Location Contig7713: 9172-13155
Sequence    

Annotation

kegg
ID vvi:100266246
description uncharacterized LOC100266246
nr
ID KDP26853.1
description hypothetical protein JCGZ_18011 [Jatropha curcas]
swissprot
ID Q14149
description MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3
trembl
ID A0A067JVM5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18011 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007713_010 0.0 - - hypothetical protein JCGZ_18011 [Jatropha curcas]
2 Hb_003773_030 0.187649586 - - -
3 Hb_007477_090 0.2039505305 - - PREDICTED: tetraspanin-18 [Jatropha curcas]
4 Hb_029299_010 0.2120596975 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
5 Hb_039305_010 0.2145668429 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
6 Hb_022500_010 0.2193621078 - - -
7 Hb_000979_050 0.2225384849 - - -
8 Hb_159085_010 0.2314867382 - - -
9 Hb_004691_040 0.2348820996 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
10 Hb_151930_020 0.2518148533 - - Wound-induced protein WIN1 precursor, putative [Ricinus communis]
11 Hb_000373_300 0.2560618953 - - hypothetical protein F775_20382 [Aegilops tauschii]
12 Hb_002498_090 0.2585676543 - - -
13 Hb_039548_010 0.2610247708 - - hypothetical protein RCOM_1685970 [Ricinus communis]
14 Hb_001101_010 0.2620223714 - - hypothetical protein POPTR_0004s18730g [Populus trichocarpa]
15 Hb_001504_320 0.2680508806 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
16 Hb_004680_020 0.2715681853 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105789475 [Gossypium raimondii]
17 Hb_002742_010 0.2719862575 - - PREDICTED: uncharacterized protein LOC104115978 [Nicotiana tomentosiformis]
18 Hb_004055_060 0.2770700036 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
19 Hb_003209_030 0.2830175185 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
20 Hb_001007_050 0.284373404 - - hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]

Gene co-expression network

sample Hb_007713_010 Hb_007713_010 Hb_003773_030 Hb_003773_030 Hb_007713_010--Hb_003773_030 Hb_007477_090 Hb_007477_090 Hb_007713_010--Hb_007477_090 Hb_029299_010 Hb_029299_010 Hb_007713_010--Hb_029299_010 Hb_039305_010 Hb_039305_010 Hb_007713_010--Hb_039305_010 Hb_022500_010 Hb_022500_010 Hb_007713_010--Hb_022500_010 Hb_000979_050 Hb_000979_050 Hb_007713_010--Hb_000979_050 Hb_003773_030--Hb_039305_010 Hb_159085_010 Hb_159085_010 Hb_003773_030--Hb_159085_010 Hb_001504_320 Hb_001504_320 Hb_003773_030--Hb_001504_320 Hb_000067_020 Hb_000067_020 Hb_003773_030--Hb_000067_020 Hb_003773_030--Hb_000979_050 Hb_151930_020 Hb_151930_020 Hb_007477_090--Hb_151930_020 Hb_000777_060 Hb_000777_060 Hb_007477_090--Hb_000777_060 Hb_004055_060 Hb_004055_060 Hb_007477_090--Hb_004055_060 Hb_001279_250 Hb_001279_250 Hb_007477_090--Hb_001279_250 Hb_010362_020 Hb_010362_020 Hb_007477_090--Hb_010362_020 Hb_000853_360 Hb_000853_360 Hb_007477_090--Hb_000853_360 Hb_029299_010--Hb_022500_010 Hb_029299_010--Hb_039305_010 Hb_002498_090 Hb_002498_090 Hb_029299_010--Hb_002498_090 Hb_029299_010--Hb_003773_030 Hb_012324_020 Hb_012324_020 Hb_029299_010--Hb_012324_020 Hb_039305_010--Hb_000067_020 Hb_039305_010--Hb_000979_050 Hb_000736_010 Hb_000736_010 Hb_039305_010--Hb_000736_010 Hb_008092_140 Hb_008092_140 Hb_039305_010--Hb_008092_140 Hb_039305_010--Hb_159085_010 Hb_004116_110 Hb_004116_110 Hb_022500_010--Hb_004116_110 Hb_015401_010 Hb_015401_010 Hb_022500_010--Hb_015401_010 Hb_000367_170 Hb_000367_170 Hb_022500_010--Hb_000367_170 Hb_188382_010 Hb_188382_010 Hb_022500_010--Hb_188382_010 Hb_000979_050--Hb_008092_140 Hb_004917_050 Hb_004917_050 Hb_000979_050--Hb_004917_050 Hb_009467_030 Hb_009467_030 Hb_000979_050--Hb_009467_030 Hb_000979_050--Hb_000067_020 Hb_001386_080 Hb_001386_080 Hb_000979_050--Hb_001386_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0253296 0 0 0 0.137057 0.0438324
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.231999 0.437947 0 0.0146525 0

CAGE analysis