Hb_039305_010

Information

Type -
Description -
Location Contig39305: 472-2975
Sequence    

Annotation

kegg
ID rcu:RCOM_1685860
description protein binding protein, putative
nr
ID KDP29847.1
description hypothetical protein JCGZ_18422 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K142
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18422 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039305_010 0.0 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
2 Hb_000067_020 0.1428745866 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
3 Hb_000979_050 0.1516741061 - - -
4 Hb_000736_010 0.160150219 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
5 Hb_008092_140 0.165143388 - - PREDICTED: uncharacterized protein LOC103636948 [Zea mays]
6 Hb_003773_030 0.1665388045 - - -
7 Hb_159085_010 0.1884989518 - - -
8 Hb_001379_130 0.1958584349 - - PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Jatropha curcas]
9 Hb_000003_770 0.2043789249 - - -
10 Hb_001504_320 0.208475055 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
11 Hb_039548_010 0.2114084091 - - hypothetical protein RCOM_1685970 [Ricinus communis]
12 Hb_007713_010 0.2145668429 - - hypothetical protein JCGZ_18011 [Jatropha curcas]
13 Hb_029299_010 0.2220313855 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
14 Hb_009467_030 0.2278656078 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
15 Hb_000270_150 0.2287816375 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
16 Hb_012324_020 0.2340833594 - - -
17 Hb_148262_020 0.2341840113 - - -
18 Hb_005222_020 0.2352708662 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
19 Hb_094721_010 0.2356362013 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]
20 Hb_000008_260 0.23783005 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_039305_010 Hb_039305_010 Hb_000067_020 Hb_000067_020 Hb_039305_010--Hb_000067_020 Hb_000979_050 Hb_000979_050 Hb_039305_010--Hb_000979_050 Hb_000736_010 Hb_000736_010 Hb_039305_010--Hb_000736_010 Hb_008092_140 Hb_008092_140 Hb_039305_010--Hb_008092_140 Hb_003773_030 Hb_003773_030 Hb_039305_010--Hb_003773_030 Hb_159085_010 Hb_159085_010 Hb_039305_010--Hb_159085_010 Hb_000270_150 Hb_000270_150 Hb_000067_020--Hb_000270_150 Hb_000067_020--Hb_000736_010 Hb_000067_020--Hb_000979_050 Hb_000067_020--Hb_003773_030 Hb_000067_020--Hb_008092_140 Hb_000979_050--Hb_008092_140 Hb_004917_050 Hb_004917_050 Hb_000979_050--Hb_004917_050 Hb_009467_030 Hb_009467_030 Hb_000979_050--Hb_009467_030 Hb_001386_080 Hb_001386_080 Hb_000979_050--Hb_001386_080 Hb_148262_020 Hb_148262_020 Hb_000736_010--Hb_148262_020 Hb_000736_010--Hb_159085_010 Hb_002233_110 Hb_002233_110 Hb_000736_010--Hb_002233_110 Hb_005222_020 Hb_005222_020 Hb_000736_010--Hb_005222_020 Hb_008092_140--Hb_001386_080 Hb_002997_130 Hb_002997_130 Hb_008092_140--Hb_002997_130 Hb_028462_010 Hb_028462_010 Hb_008092_140--Hb_028462_010 Hb_123098_010 Hb_123098_010 Hb_008092_140--Hb_123098_010 Hb_004899_270 Hb_004899_270 Hb_008092_140--Hb_004899_270 Hb_000111_160 Hb_000111_160 Hb_008092_140--Hb_000111_160 Hb_007713_010 Hb_007713_010 Hb_003773_030--Hb_007713_010 Hb_003773_030--Hb_159085_010 Hb_001504_320 Hb_001504_320 Hb_003773_030--Hb_001504_320 Hb_003773_030--Hb_000979_050 Hb_001141_400 Hb_001141_400 Hb_159085_010--Hb_001141_400 Hb_000373_300 Hb_000373_300 Hb_159085_010--Hb_000373_300 Hb_159085_010--Hb_000067_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.294304 0 0 0 2.50869 2.9932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.7611 18.0134 0 0 0

CAGE analysis