Hb_002997_130

Information

Type -
Description -
Location Contig2997: 96061-96351
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002997_130 0.0 - - -
2 Hb_028462_010 0.0003642905 - - PREDICTED: uncharacterized protein LOC101509514 [Cicer arietinum]
3 Hb_123098_010 0.0003669985 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_004899_270 0.0003875599 - - PREDICTED: beta-galactosidase 15-like [Cucumis sativus]
5 Hb_000111_160 0.0004154329 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
6 Hb_018006_020 0.0004768542 - - PREDICTED: uncharacterized protein LOC105641417 [Jatropha curcas]
7 Hb_006053_010 0.0004940828 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
8 Hb_000914_160 0.0005063856 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Glycine max]
9 Hb_007393_010 0.0005253368 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
10 Hb_000413_310 0.0006234418 - - -
11 Hb_000098_160 0.0006361585 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003052_160 0.0006361585 - - -
13 Hb_002130_010 0.0007006343 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
14 Hb_061463_010 0.0007135206 - - Cucumisin precursor, putative [Ricinus communis]
15 Hb_185616_010 0.0007508194 - - Ran GTPase binding protein, putative [Ricinus communis]
16 Hb_012543_020 0.0007578135 - - -
17 Hb_000482_130 0.0007621738 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
18 Hb_000510_380 0.0007670663 - - -
19 Hb_000270_820 0.0526038109 - - -
20 Hb_003675_010 0.0839575925 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002997_130 Hb_002997_130 Hb_028462_010 Hb_028462_010 Hb_002997_130--Hb_028462_010 Hb_123098_010 Hb_123098_010 Hb_002997_130--Hb_123098_010 Hb_004899_270 Hb_004899_270 Hb_002997_130--Hb_004899_270 Hb_000111_160 Hb_000111_160 Hb_002997_130--Hb_000111_160 Hb_018006_020 Hb_018006_020 Hb_002997_130--Hb_018006_020 Hb_006053_010 Hb_006053_010 Hb_002997_130--Hb_006053_010 Hb_028462_010--Hb_123098_010 Hb_028462_010--Hb_004899_270 Hb_028462_010--Hb_000111_160 Hb_028462_010--Hb_018006_020 Hb_028462_010--Hb_006053_010 Hb_000914_160 Hb_000914_160 Hb_028462_010--Hb_000914_160 Hb_123098_010--Hb_004899_270 Hb_123098_010--Hb_000111_160 Hb_123098_010--Hb_018006_020 Hb_123098_010--Hb_006053_010 Hb_123098_010--Hb_000914_160 Hb_004899_270--Hb_000111_160 Hb_004899_270--Hb_018006_020 Hb_004899_270--Hb_006053_010 Hb_004899_270--Hb_000914_160 Hb_000111_160--Hb_018006_020 Hb_000111_160--Hb_006053_010 Hb_000111_160--Hb_000914_160 Hb_018006_020--Hb_006053_010 Hb_018006_020--Hb_000914_160 Hb_007393_010 Hb_007393_010 Hb_018006_020--Hb_007393_010 Hb_006053_010--Hb_000914_160 Hb_006053_010--Hb_007393_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.404731 0.319056 0 0 0

CAGE analysis