Hb_003773_030

Information

Type -
Description -
Location Contig3773: 179648-186385
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003773_030 0.0 - - -
2 Hb_039305_010 0.1665388045 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
3 Hb_007713_010 0.187649586 - - hypothetical protein JCGZ_18011 [Jatropha curcas]
4 Hb_159085_010 0.2021517369 - - -
5 Hb_001504_320 0.2038436691 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
6 Hb_000067_020 0.2038877473 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
7 Hb_000979_050 0.2080449223 - - -
8 Hb_000373_300 0.217877435 - - hypothetical protein F775_20382 [Aegilops tauschii]
9 Hb_008092_140 0.2207542017 - - PREDICTED: uncharacterized protein LOC103636948 [Zea mays]
10 Hb_001101_010 0.2211574596 - - hypothetical protein POPTR_0004s18730g [Populus trichocarpa]
11 Hb_000736_010 0.2292281361 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
12 Hb_000184_190 0.2322089462 - - hypothetical protein VITISV_016970 [Vitis vinifera]
13 Hb_029299_010 0.2453606169 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
14 Hb_002498_090 0.2546171131 - - -
15 Hb_001386_080 0.2566104038 - - hypothetical protein JCGZ_06052 [Jatropha curcas]
16 Hb_003837_020 0.2572148939 - - PREDICTED: uncharacterized protein LOC103710465 isoform X1 [Phoenix dactylifera]
17 Hb_009467_030 0.2634572268 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
18 Hb_001842_120 0.2640124552 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
19 Hb_001007_050 0.2691261779 - - hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
20 Hb_002918_300 0.2700037522 - - -

Gene co-expression network

sample Hb_003773_030 Hb_003773_030 Hb_039305_010 Hb_039305_010 Hb_003773_030--Hb_039305_010 Hb_007713_010 Hb_007713_010 Hb_003773_030--Hb_007713_010 Hb_159085_010 Hb_159085_010 Hb_003773_030--Hb_159085_010 Hb_001504_320 Hb_001504_320 Hb_003773_030--Hb_001504_320 Hb_000067_020 Hb_000067_020 Hb_003773_030--Hb_000067_020 Hb_000979_050 Hb_000979_050 Hb_003773_030--Hb_000979_050 Hb_039305_010--Hb_000067_020 Hb_039305_010--Hb_000979_050 Hb_000736_010 Hb_000736_010 Hb_039305_010--Hb_000736_010 Hb_008092_140 Hb_008092_140 Hb_039305_010--Hb_008092_140 Hb_039305_010--Hb_159085_010 Hb_007477_090 Hb_007477_090 Hb_007713_010--Hb_007477_090 Hb_029299_010 Hb_029299_010 Hb_007713_010--Hb_029299_010 Hb_007713_010--Hb_039305_010 Hb_022500_010 Hb_022500_010 Hb_007713_010--Hb_022500_010 Hb_007713_010--Hb_000979_050 Hb_159085_010--Hb_000736_010 Hb_001141_400 Hb_001141_400 Hb_159085_010--Hb_001141_400 Hb_000373_300 Hb_000373_300 Hb_159085_010--Hb_000373_300 Hb_159085_010--Hb_000067_020 Hb_001425_110 Hb_001425_110 Hb_001504_320--Hb_001425_110 Hb_001842_120 Hb_001842_120 Hb_001504_320--Hb_001842_120 Hb_001101_010 Hb_001101_010 Hb_001504_320--Hb_001101_010 Hb_001504_320--Hb_008092_140 Hb_003837_020 Hb_003837_020 Hb_001504_320--Hb_003837_020 Hb_000270_150 Hb_000270_150 Hb_000067_020--Hb_000270_150 Hb_000067_020--Hb_000736_010 Hb_000067_020--Hb_000979_050 Hb_000067_020--Hb_008092_140 Hb_000979_050--Hb_008092_140 Hb_004917_050 Hb_004917_050 Hb_000979_050--Hb_004917_050 Hb_009467_030 Hb_009467_030 Hb_000979_050--Hb_009467_030 Hb_001386_080 Hb_001386_080 Hb_000979_050--Hb_001386_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.306876 0 0 0 0.668269 0.279181
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.19542 4.53847 0 0 0.182619

CAGE analysis