Hb_159085_010

Information

Type -
Description -
Location Contig159085: 2-531
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159085_010 0.0 - - -
2 Hb_039305_010 0.1884989518 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
3 Hb_000736_010 0.1914447676 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
4 Hb_003773_030 0.2021517369 - - -
5 Hb_001141_400 0.2049039411 - - hypothetical protein B456_007G2854002, partial [Gossypium raimondii]
6 Hb_000373_300 0.2116994288 - - hypothetical protein F775_20382 [Aegilops tauschii]
7 Hb_000067_020 0.2126346793 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
8 Hb_000008_260 0.2179868848 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007904_270 0.2181066093 - - -
10 Hb_009467_030 0.2211090158 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
11 Hb_039548_010 0.2258709185 - - hypothetical protein RCOM_1685970 [Ricinus communis]
12 Hb_007713_010 0.2314867382 - - hypothetical protein JCGZ_18011 [Jatropha curcas]
13 Hb_102438_010 0.2320042267 - - -
14 Hb_005736_040 0.2361920606 - - -
15 Hb_000979_050 0.2431547753 - - -
16 Hb_004958_030 0.2528066237 - - PREDICTED: uncharacterized protein LOC104904188 [Beta vulgaris subsp. vulgaris]
17 Hb_188382_010 0.2534800157 - - Ran GTPase binding protein, putative [Ricinus communis]
18 Hb_000501_020 0.2545859672 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
19 Hb_002742_010 0.2559018475 - - PREDICTED: uncharacterized protein LOC104115978 [Nicotiana tomentosiformis]
20 Hb_007741_040 0.2572406865 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105643153 [Jatropha curcas]

Gene co-expression network

sample Hb_159085_010 Hb_159085_010 Hb_039305_010 Hb_039305_010 Hb_159085_010--Hb_039305_010 Hb_000736_010 Hb_000736_010 Hb_159085_010--Hb_000736_010 Hb_003773_030 Hb_003773_030 Hb_159085_010--Hb_003773_030 Hb_001141_400 Hb_001141_400 Hb_159085_010--Hb_001141_400 Hb_000373_300 Hb_000373_300 Hb_159085_010--Hb_000373_300 Hb_000067_020 Hb_000067_020 Hb_159085_010--Hb_000067_020 Hb_039305_010--Hb_000067_020 Hb_000979_050 Hb_000979_050 Hb_039305_010--Hb_000979_050 Hb_039305_010--Hb_000736_010 Hb_008092_140 Hb_008092_140 Hb_039305_010--Hb_008092_140 Hb_039305_010--Hb_003773_030 Hb_148262_020 Hb_148262_020 Hb_000736_010--Hb_148262_020 Hb_000736_010--Hb_000067_020 Hb_002233_110 Hb_002233_110 Hb_000736_010--Hb_002233_110 Hb_005222_020 Hb_005222_020 Hb_000736_010--Hb_005222_020 Hb_007713_010 Hb_007713_010 Hb_003773_030--Hb_007713_010 Hb_001504_320 Hb_001504_320 Hb_003773_030--Hb_001504_320 Hb_003773_030--Hb_000067_020 Hb_003773_030--Hb_000979_050 Hb_001141_400--Hb_000373_300 Hb_002742_010 Hb_002742_010 Hb_001141_400--Hb_002742_010 Hb_028365_010 Hb_028365_010 Hb_001141_400--Hb_028365_010 Hb_010128_110 Hb_010128_110 Hb_001141_400--Hb_010128_110 Hb_188382_010 Hb_188382_010 Hb_001141_400--Hb_188382_010 Hb_000373_300--Hb_002742_010 Hb_002741_030 Hb_002741_030 Hb_000373_300--Hb_002741_030 Hb_000861_050 Hb_000861_050 Hb_000373_300--Hb_000861_050 Hb_001143_010 Hb_001143_010 Hb_000373_300--Hb_001143_010 Hb_000270_150 Hb_000270_150 Hb_000067_020--Hb_000270_150 Hb_000067_020--Hb_000979_050 Hb_000067_020--Hb_008092_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0883136 0 0 0 0.202686 0.0618104
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.805728 0.506305 0 0 0

CAGE analysis