Hb_025161_030

Information

Type -
Description -
Location Contig25161: 16993-18969
Sequence    

Annotation

kegg
ID rcu:RCOM_0574930
description receptor serine/threonine kinase, putative
nr
ID XP_012066187.1
description PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
swissprot
ID P0CH01
description Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1
trembl
ID A0A067LE94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23767 PE=3 SV=1
Gene Ontology
ID GO:0016772
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025161_030 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
2 Hb_094484_010 0.1199454009 - - kinase, putative [Ricinus communis]
3 Hb_010721_040 0.1274627467 transcription factor TF Family: M-type unnamed protein product [Vitis vinifera]
4 Hb_128750_010 0.1425558529 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
5 Hb_102761_010 0.1457995855 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
6 Hb_004530_010 0.1692248238 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
7 Hb_000415_080 0.1721372712 - - -
8 Hb_097783_030 0.1787403326 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
9 Hb_004896_030 0.1809922921 - - hypothetical protein VITISV_007475 [Vitis vinifera]
10 Hb_005092_070 0.1824249164 - - Oligopeptide transporter, putative [Ricinus communis]
11 Hb_005622_040 0.1844566334 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
12 Hb_004274_010 0.1852858014 - - PREDICTED: uncharacterized protein LOC104451199 [Eucalyptus grandis]
13 Hb_000627_110 0.185605101 - - cellulose synthase, putative [Ricinus communis]
14 Hb_001248_140 0.1879814815 - - Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative [Ricinus communis]
15 Hb_000914_010 0.1880552103 - - hypothetical protein POPTR_0025s00760g [Populus trichocarpa]
16 Hb_040245_010 0.1893165456 - - hypothetical protein CISIN_1g039575mg, partial [Citrus sinensis]
17 Hb_159308_020 0.189365316 - - hypothetical protein B456_002G027900 [Gossypium raimondii]
18 Hb_002081_140 0.1897929706 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001452_150 0.190395134 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
20 Hb_151870_010 0.1910457338 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_025161_030 Hb_025161_030 Hb_094484_010 Hb_094484_010 Hb_025161_030--Hb_094484_010 Hb_010721_040 Hb_010721_040 Hb_025161_030--Hb_010721_040 Hb_128750_010 Hb_128750_010 Hb_025161_030--Hb_128750_010 Hb_102761_010 Hb_102761_010 Hb_025161_030--Hb_102761_010 Hb_004530_010 Hb_004530_010 Hb_025161_030--Hb_004530_010 Hb_000415_080 Hb_000415_080 Hb_025161_030--Hb_000415_080 Hb_094484_010--Hb_010721_040 Hb_094484_010--Hb_102761_010 Hb_094484_010--Hb_000415_080 Hb_004274_010 Hb_004274_010 Hb_094484_010--Hb_004274_010 Hb_001452_150 Hb_001452_150 Hb_094484_010--Hb_001452_150 Hb_010721_040--Hb_102761_010 Hb_010721_040--Hb_004530_010 Hb_000343_090 Hb_000343_090 Hb_010721_040--Hb_000343_090 Hb_008714_030 Hb_008714_030 Hb_010721_040--Hb_008714_030 Hb_002740_060 Hb_002740_060 Hb_128750_010--Hb_002740_060 Hb_029386_010 Hb_029386_010 Hb_128750_010--Hb_029386_010 Hb_004896_030 Hb_004896_030 Hb_128750_010--Hb_004896_030 Hb_000445_160 Hb_000445_160 Hb_128750_010--Hb_000445_160 Hb_000223_090 Hb_000223_090 Hb_128750_010--Hb_000223_090 Hb_005622_040 Hb_005622_040 Hb_128750_010--Hb_005622_040 Hb_102761_010--Hb_004530_010 Hb_014510_030 Hb_014510_030 Hb_102761_010--Hb_014510_030 Hb_102761_010--Hb_000415_080 Hb_102761_010--Hb_004896_030 Hb_000627_110 Hb_000627_110 Hb_102761_010--Hb_000627_110 Hb_044380_010 Hb_044380_010 Hb_004530_010--Hb_044380_010 Hb_000997_370 Hb_000997_370 Hb_004530_010--Hb_000997_370 Hb_003714_030 Hb_003714_030 Hb_004530_010--Hb_003714_030 Hb_001248_140 Hb_001248_140 Hb_004530_010--Hb_001248_140 Hb_040245_010 Hb_040245_010 Hb_000415_080--Hb_040245_010 Hb_003073_030 Hb_003073_030 Hb_000415_080--Hb_003073_030 Hb_000415_080--Hb_000627_110 Hb_000415_080--Hb_014510_030 Hb_000199_090 Hb_000199_090 Hb_000415_080--Hb_000199_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0245997 0.131351 0 0.0160075
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.078523 0.408744

CAGE analysis