Hb_015763_020

Information

Type -
Description -
Location Contig15763: 32161-33958
Sequence    

Annotation

kegg
ID rcu:RCOM_1721330
description hypothetical protein
nr
ID XP_012075967.1
description PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KRQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1
Gene Ontology
ID GO:0005886
description keratin-associated protein 10-6 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13772: 32319-33845 , PASA_asmbl_13773: 32400-32583
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015763_020 0.0 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
2 Hb_000227_380 0.0828911307 - - PREDICTED: protein TIME FOR COFFEE isoform X3 [Jatropha curcas]
3 Hb_000264_100 0.0831505413 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000120_610 0.0881345351 - - mitotic control protein dis3, putative [Ricinus communis]
5 Hb_000002_440 0.0891474843 - - PREDICTED: MATH domain-containing protein At5g43560-like [Jatropha curcas]
6 Hb_004899_070 0.0898436741 - - PREDICTED: RRP12-like protein [Jatropha curcas]
7 Hb_000594_020 0.0912664326 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25 isoform X2 [Jatropha curcas]
8 Hb_003866_020 0.0925272118 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004970_160 0.0931053556 - - PREDICTED: THO complex subunit 5B-like isoform X2 [Jatropha curcas]
10 Hb_000023_060 0.0961375503 - - PREDICTED: uncharacterized protein LOC105633775 [Jatropha curcas]
11 Hb_000813_100 0.0987265036 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
12 Hb_000098_130 0.0987587865 - - PREDICTED: serine/threonine-protein kinase SRK2A [Jatropha curcas]
13 Hb_001396_260 0.0987666807 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
14 Hb_000821_010 0.1013956152 - - PREDICTED: auxin response factor 19-like [Jatropha curcas]
15 Hb_006588_050 0.1016763214 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A [Jatropha curcas]
16 Hb_057451_010 0.1020800073 - - PREDICTED: uncharacterized protein LOC105635588 [Jatropha curcas]
17 Hb_002659_060 0.1032763949 - - PREDICTED: SWI/SNF complex subunit SWI3B [Jatropha curcas]
18 Hb_004920_130 0.103407267 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
19 Hb_000261_290 0.1035508452 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
20 Hb_009028_030 0.1046763976 desease resistance Gene Name: NB-ARC NBS type disease resistance protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_015763_020 Hb_015763_020 Hb_000227_380 Hb_000227_380 Hb_015763_020--Hb_000227_380 Hb_000264_100 Hb_000264_100 Hb_015763_020--Hb_000264_100 Hb_000120_610 Hb_000120_610 Hb_015763_020--Hb_000120_610 Hb_000002_440 Hb_000002_440 Hb_015763_020--Hb_000002_440 Hb_004899_070 Hb_004899_070 Hb_015763_020--Hb_004899_070 Hb_000594_020 Hb_000594_020 Hb_015763_020--Hb_000594_020 Hb_003866_020 Hb_003866_020 Hb_000227_380--Hb_003866_020 Hb_007849_020 Hb_007849_020 Hb_000227_380--Hb_007849_020 Hb_175338_020 Hb_175338_020 Hb_000227_380--Hb_175338_020 Hb_000239_070 Hb_000239_070 Hb_000227_380--Hb_000239_070 Hb_000227_380--Hb_000002_440 Hb_001080_270 Hb_001080_270 Hb_000227_380--Hb_001080_270 Hb_000264_100--Hb_000120_610 Hb_000997_030 Hb_000997_030 Hb_000264_100--Hb_000997_030 Hb_030565_090 Hb_030565_090 Hb_000264_100--Hb_030565_090 Hb_140049_020 Hb_140049_020 Hb_000264_100--Hb_140049_020 Hb_000264_100--Hb_000594_020 Hb_000264_100--Hb_004899_070 Hb_000120_610--Hb_000594_020 Hb_002659_060 Hb_002659_060 Hb_000120_610--Hb_002659_060 Hb_000120_610--Hb_140049_020 Hb_000120_610--Hb_004899_070 Hb_004970_160 Hb_004970_160 Hb_000120_610--Hb_004970_160 Hb_025477_060 Hb_025477_060 Hb_000002_440--Hb_025477_060 Hb_000813_100 Hb_000813_100 Hb_000002_440--Hb_000813_100 Hb_000096_180 Hb_000096_180 Hb_000002_440--Hb_000096_180 Hb_000002_440--Hb_000594_020 Hb_002883_010 Hb_002883_010 Hb_000002_440--Hb_002883_010 Hb_000098_130 Hb_000098_130 Hb_004899_070--Hb_000098_130 Hb_000261_290 Hb_000261_290 Hb_004899_070--Hb_000261_290 Hb_000120_620 Hb_000120_620 Hb_004899_070--Hb_000120_620 Hb_004899_070--Hb_004970_160 Hb_000640_200 Hb_000640_200 Hb_004899_070--Hb_000640_200 Hb_004899_070--Hb_000813_100 Hb_000594_020--Hb_000813_100 Hb_000594_020--Hb_002659_060 Hb_000594_020--Hb_004899_070 Hb_002411_120 Hb_002411_120 Hb_000594_020--Hb_002411_120 Hb_000594_020--Hb_004970_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
165.587 150.669 29.7816 33.8699 195.635 176.508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.9325 28.0196 36.466 109.554 30.6682

CAGE analysis