Hb_014834_130

Information

Type -
Description -
Location Contig14834: 81976-85558
Sequence    

Annotation

kegg
ID vvi:100852627
description formyltetrahydrofolate deformylase 1, mitochondrial
nr
ID XP_012070010.1
description PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
swissprot
ID Q93YQ3
description Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana GN=PURU1 PE=1 SV=1
trembl
ID A0A067KUK0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03417 PE=4 SV=1
Gene Ontology
ID GO:0008168
description formyltetrahydrofolate deformylase mitochondrial isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12182: 83950-85161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014834_130 0.0 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
2 Hb_000638_160 0.0999484895 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
3 Hb_001712_020 0.1108150205 - - PREDICTED: uncharacterized protein LOC105641948 [Jatropha curcas]
4 Hb_005846_030 0.113454121 - - PREDICTED: 50S ribosomal protein L29, chloroplastic [Jatropha curcas]
5 Hb_011689_120 0.1153970223 - - PREDICTED: uncharacterized protein At4g15545 [Jatropha curcas]
6 Hb_001301_340 0.1219455238 - - endoribonuclease L-PSP family protein [Populus trichocarpa]
7 Hb_006846_150 0.1261344478 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000035_240 0.1277164473 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000877_080 0.1303536291 - - PREDICTED: uncharacterized protein LOC105640901 [Jatropha curcas]
10 Hb_001277_100 0.1305526115 - - PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like isoform X1 [Gossypium raimondii]
11 Hb_000487_260 0.1305706701 - - PREDICTED: protein Iojap, chloroplastic [Jatropha curcas]
12 Hb_019053_060 0.1328860539 - - PREDICTED: uncharacterized protein LOC105632672 [Jatropha curcas]
13 Hb_001946_140 0.1380533497 - - PREDICTED: heme oxygenase 1, chloroplastic-like [Jatropha curcas]
14 Hb_000167_050 0.1390980925 - - PREDICTED: uncharacterized protein LOC105641106 [Jatropha curcas]
15 Hb_005725_220 0.1418438149 - - PREDICTED: uncharacterized protein LOC105630808 [Jatropha curcas]
16 Hb_001558_080 0.1419762206 - - PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_000394_180 0.1435034717 - - PREDICTED: uncharacterized protein LOC105636995 [Jatropha curcas]
18 Hb_000317_260 0.1435574437 - - unknown [Populus trichocarpa]
19 Hb_003747_230 0.1439529454 - - PREDICTED: uncharacterized protein LOC105630239 isoform X1 [Jatropha curcas]
20 Hb_000811_070 0.1452632151 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]

Gene co-expression network

sample Hb_014834_130 Hb_014834_130 Hb_000638_160 Hb_000638_160 Hb_014834_130--Hb_000638_160 Hb_001712_020 Hb_001712_020 Hb_014834_130--Hb_001712_020 Hb_005846_030 Hb_005846_030 Hb_014834_130--Hb_005846_030 Hb_011689_120 Hb_011689_120 Hb_014834_130--Hb_011689_120 Hb_001301_340 Hb_001301_340 Hb_014834_130--Hb_001301_340 Hb_006846_150 Hb_006846_150 Hb_014834_130--Hb_006846_150 Hb_000167_050 Hb_000167_050 Hb_000638_160--Hb_000167_050 Hb_000638_160--Hb_005846_030 Hb_000638_160--Hb_011689_120 Hb_000622_240 Hb_000622_240 Hb_000638_160--Hb_000622_240 Hb_000462_090 Hb_000462_090 Hb_000638_160--Hb_000462_090 Hb_000877_080 Hb_000877_080 Hb_001712_020--Hb_000877_080 Hb_001712_020--Hb_005846_030 Hb_001712_020--Hb_011689_120 Hb_001712_020--Hb_006846_150 Hb_000317_260 Hb_000317_260 Hb_001712_020--Hb_000317_260 Hb_007632_170 Hb_007632_170 Hb_005846_030--Hb_007632_170 Hb_005725_220 Hb_005725_220 Hb_005846_030--Hb_005725_220 Hb_000164_140 Hb_000164_140 Hb_005846_030--Hb_000164_140 Hb_005846_030--Hb_000167_050 Hb_011689_120--Hb_006846_150 Hb_001322_110 Hb_001322_110 Hb_011689_120--Hb_001322_110 Hb_000403_070 Hb_000403_070 Hb_011689_120--Hb_000403_070 Hb_002872_050 Hb_002872_050 Hb_011689_120--Hb_002872_050 Hb_000811_070 Hb_000811_070 Hb_011689_120--Hb_000811_070 Hb_001318_260 Hb_001318_260 Hb_011689_120--Hb_001318_260 Hb_000035_240 Hb_000035_240 Hb_001301_340--Hb_000035_240 Hb_007894_050 Hb_007894_050 Hb_001301_340--Hb_007894_050 Hb_001301_340--Hb_000317_260 Hb_000394_180 Hb_000394_180 Hb_001301_340--Hb_000394_180 Hb_001369_790 Hb_001369_790 Hb_001301_340--Hb_001369_790 Hb_000392_550 Hb_000392_550 Hb_001301_340--Hb_000392_550 Hb_006846_150--Hb_000811_070 Hb_006846_150--Hb_000403_070 Hb_000487_260 Hb_000487_260 Hb_006846_150--Hb_000487_260 Hb_004951_060 Hb_004951_060 Hb_006846_150--Hb_004951_060 Hb_012799_170 Hb_012799_170 Hb_006846_150--Hb_012799_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.47089 3.42979 31.5603 13.1925 8.29005 5.09556
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.1039 28.8151 19.3285 6.07047 38.6779

CAGE analysis