Hb_014720_090

Information

Type -
Description -
Location Contig14720: 123489-126375
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014720_090 0.0 - - -
2 Hb_001141_290 0.2115978845 - - -
3 Hb_007672_030 0.2327796897 transcription factor TF Family: LOB LOB domain-containing 36 -like protein [Gossypium arboreum]
4 Hb_003055_150 0.2341043376 - - serine carboxypeptidase, putative [Ricinus communis]
5 Hb_163206_010 0.3042789721 - - hypothetical protein JCGZ_01203 [Jatropha curcas]
6 Hb_000866_250 0.3103840501 - - acyl-CoA thioesterase, putative [Ricinus communis]
7 Hb_094890_010 0.3121930827 - - -
8 Hb_007157_030 0.3204149123 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
9 Hb_000599_320 0.3214181931 - - hypothetical protein JCGZ_17662 [Jatropha curcas]
10 Hb_011540_030 0.3303030535 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX5-like isoform X6 [Glycine max]
11 Hb_011472_010 0.3310829496 - - PREDICTED: protein yippee-like [Jatropha curcas]
12 Hb_009707_030 0.331874893 - - PREDICTED: ankyrin repeat-containing protein At5g02620 [Jatropha curcas]
13 Hb_000117_100 0.3368495645 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007904_240 0.3392403761 - - PREDICTED: protein terminal ear1 [Jatropha curcas]
15 Hb_001080_010 0.3419226877 - - -
16 Hb_000072_340 0.3421417157 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000732_210 0.342245921 - - hexose transporter 1 [Hevea brasiliensis]
18 Hb_002998_070 0.346146403 - - hypothetical protein CARUB_v10019139mg, partial [Capsella rubella]
19 Hb_000094_240 0.3470635745 - - PREDICTED: uncharacterized protein LOC105633775 [Jatropha curcas]
20 Hb_006726_010 0.3525134022 - - PREDICTED: uncharacterized protein K02A2.6-like [Nicotiana sylvestris]

Gene co-expression network

sample Hb_014720_090 Hb_014720_090 Hb_001141_290 Hb_001141_290 Hb_014720_090--Hb_001141_290 Hb_007672_030 Hb_007672_030 Hb_014720_090--Hb_007672_030 Hb_003055_150 Hb_003055_150 Hb_014720_090--Hb_003055_150 Hb_163206_010 Hb_163206_010 Hb_014720_090--Hb_163206_010 Hb_000866_250 Hb_000866_250 Hb_014720_090--Hb_000866_250 Hb_094890_010 Hb_094890_010 Hb_014720_090--Hb_094890_010 Hb_001141_290--Hb_000866_250 Hb_001141_290--Hb_094890_010 Hb_001141_290--Hb_003055_150 Hb_011081_040 Hb_011081_040 Hb_001141_290--Hb_011081_040 Hb_001080_010 Hb_001080_010 Hb_001141_290--Hb_001080_010 Hb_002998_070 Hb_002998_070 Hb_007672_030--Hb_002998_070 Hb_000732_210 Hb_000732_210 Hb_007672_030--Hb_000732_210 Hb_021576_020 Hb_021576_020 Hb_007672_030--Hb_021576_020 Hb_000042_220 Hb_000042_220 Hb_007672_030--Hb_000042_220 Hb_011472_010 Hb_011472_010 Hb_007672_030--Hb_011472_010 Hb_003055_150--Hb_094890_010 Hb_080749_010 Hb_080749_010 Hb_003055_150--Hb_080749_010 Hb_011249_040 Hb_011249_040 Hb_003055_150--Hb_011249_040 Hb_003020_170 Hb_003020_170 Hb_003055_150--Hb_003020_170 Hb_000094_240 Hb_000094_240 Hb_163206_010--Hb_000094_240 Hb_007157_030 Hb_007157_030 Hb_163206_010--Hb_007157_030 Hb_000450_160 Hb_000450_160 Hb_163206_010--Hb_000450_160 Hb_000926_100 Hb_000926_100 Hb_163206_010--Hb_000926_100 Hb_000117_100 Hb_000117_100 Hb_163206_010--Hb_000117_100 Hb_163206_010--Hb_002998_070 Hb_000866_250--Hb_001080_010 Hb_003095_080 Hb_003095_080 Hb_000866_250--Hb_003095_080 Hb_185111_010 Hb_185111_010 Hb_000866_250--Hb_185111_010 Hb_010921_040 Hb_010921_040 Hb_000866_250--Hb_010921_040 Hb_000500_120 Hb_000500_120 Hb_094890_010--Hb_000500_120 Hb_094890_010--Hb_080749_010 Hb_094890_010--Hb_011081_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0562728 0.196139 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.13392 0.219586 0.056581 0

CAGE analysis