Hb_001080_010

Information

Type -
Description -
Location Contig1080: 480-1062
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001080_010 0.0 - - -
2 Hb_001959_150 0.218060616 - - -
3 Hb_007808_020 0.2214793934 - - -
4 Hb_000350_080 0.2286091253 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
5 Hb_005072_010 0.2431261948 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
6 Hb_000068_030 0.2475184214 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
7 Hb_000594_090 0.2599133256 - - PREDICTED: allene oxide cyclase 3, chloroplastic-like [Populus euphratica]
8 Hb_131060_010 0.2949233644 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
9 Hb_000866_250 0.2989472578 - - acyl-CoA thioesterase, putative [Ricinus communis]
10 Hb_080653_010 0.3009411322 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_001141_290 0.3037573052 - - -
12 Hb_000249_120 0.3187172916 - - PREDICTED: uncharacterized protein LOC104613364 [Nelumbo nucifera]
13 Hb_000563_260 0.3200183171 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
14 Hb_000500_120 0.3209093921 - - PREDICTED: uncharacterized protein LOC105648659 [Jatropha curcas]
15 Hb_007157_030 0.3219662129 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
16 Hb_007885_050 0.3242482252 - - PREDICTED: lignin-forming anionic peroxidase-like [Jatropha curcas]
17 Hb_000948_100 0.3301040519 - - -
18 Hb_007101_230 0.3305950501 - - leucine rich repeat-containing protein, putative [Ricinus communis]
19 Hb_003913_080 0.3322764287 - - rpl27A [Hemiselmis andersenii]
20 Hb_001477_150 0.3338425154 - - o-methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001080_010 Hb_001080_010 Hb_001959_150 Hb_001959_150 Hb_001080_010--Hb_001959_150 Hb_007808_020 Hb_007808_020 Hb_001080_010--Hb_007808_020 Hb_000350_080 Hb_000350_080 Hb_001080_010--Hb_000350_080 Hb_005072_010 Hb_005072_010 Hb_001080_010--Hb_005072_010 Hb_000068_030 Hb_000068_030 Hb_001080_010--Hb_000068_030 Hb_000594_090 Hb_000594_090 Hb_001080_010--Hb_000594_090 Hb_001959_150--Hb_005072_010 Hb_001959_150--Hb_000068_030 Hb_001959_150--Hb_000350_080 Hb_001959_150--Hb_007808_020 Hb_080653_010 Hb_080653_010 Hb_001959_150--Hb_080653_010 Hb_000249_120 Hb_000249_120 Hb_001959_150--Hb_000249_120 Hb_007808_020--Hb_000350_080 Hb_007808_020--Hb_005072_010 Hb_007808_020--Hb_000068_030 Hb_131060_010 Hb_131060_010 Hb_007808_020--Hb_131060_010 Hb_007808_020--Hb_080653_010 Hb_000350_080--Hb_005072_010 Hb_000350_080--Hb_000068_030 Hb_000350_080--Hb_080653_010 Hb_005072_010--Hb_000068_030 Hb_005072_010--Hb_080653_010 Hb_005072_010--Hb_000249_120 Hb_000068_030--Hb_080653_010 Hb_000068_030--Hb_000249_120 Hb_029879_090 Hb_029879_090 Hb_000594_090--Hb_029879_090 Hb_000836_490 Hb_000836_490 Hb_000594_090--Hb_000836_490 Hb_007885_050 Hb_007885_050 Hb_000594_090--Hb_007885_050 Hb_038134_010 Hb_038134_010 Hb_000594_090--Hb_038134_010 Hb_000563_260 Hb_000563_260 Hb_000594_090--Hb_000563_260 Hb_008725_040 Hb_008725_040 Hb_000594_090--Hb_008725_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0823158 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.334991 0.375574 0.186313 0

CAGE analysis