Hb_012760_180

Information

Type -
Description -
Location Contig12760: 112082-113012
Sequence    

Annotation

kegg
ID tcc:TCM_000152
description Basic-leucine zipper transcription factor family protein, putative
nr
ID XP_007046623.1
description Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
swissprot
ID Q84JK2
description Protein FD OS=Arabidopsis thaliana GN=FD PE=1 SV=1
trembl
ID A0A061DF98
description Basic-leucine zipper transcription factor family protein, putative OS=Theobroma cacao GN=TCM_000152 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bzip transcription factor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08437: 112085-112385
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012760_180 0.0 - - Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
2 Hb_001565_120 0.1691348507 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X1 [Jatropha curcas]
3 Hb_011885_010 0.1934197951 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
4 Hb_138575_010 0.2007120767 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
5 Hb_116635_010 0.2010204083 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
6 Hb_143863_010 0.2078529159 - - PREDICTED: uncharacterized protein LOC105113187 isoform X2 [Populus euphratica]
7 Hb_000960_010 0.2109534507 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
8 Hb_131956_010 0.218757935 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
9 Hb_090459_010 0.2210036952 - - hypothetical protein POPTR_0005s042901g, partial [Populus trichocarpa]
10 Hb_127819_010 0.2253918858 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
11 Hb_003893_020 0.2263222551 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like isoform X2 [Jatropha curcas]
12 Hb_001529_030 0.2263985777 - - hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
13 Hb_102100_010 0.2274574038 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
14 Hb_088084_010 0.2276999016 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
15 Hb_004545_100 0.2301873911 - - PREDICTED: protein BONZAI 3 [Jatropha curcas]
16 Hb_042553_010 0.2313632831 - - PREDICTED: glutathione S-transferase T1-like [Jatropha curcas]
17 Hb_056012_010 0.2380695912 - - PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]
18 Hb_007885_080 0.239794653 - - PREDICTED: uncharacterized protein LOC105645857 isoform X1 [Jatropha curcas]
19 Hb_001277_140 0.2399227064 - - PREDICTED: plasma membrane calcium-transporting ATPase 2-like [Takifugu rubripes]
20 Hb_009897_020 0.2424347995 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]

Gene co-expression network

sample Hb_012760_180 Hb_012760_180 Hb_001565_120 Hb_001565_120 Hb_012760_180--Hb_001565_120 Hb_011885_010 Hb_011885_010 Hb_012760_180--Hb_011885_010 Hb_138575_010 Hb_138575_010 Hb_012760_180--Hb_138575_010 Hb_116635_010 Hb_116635_010 Hb_012760_180--Hb_116635_010 Hb_143863_010 Hb_143863_010 Hb_012760_180--Hb_143863_010 Hb_000960_010 Hb_000960_010 Hb_012760_180--Hb_000960_010 Hb_090459_010 Hb_090459_010 Hb_001565_120--Hb_090459_010 Hb_127819_010 Hb_127819_010 Hb_001565_120--Hb_127819_010 Hb_116685_010 Hb_116685_010 Hb_001565_120--Hb_116685_010 Hb_001565_120--Hb_000960_010 Hb_001565_120--Hb_011885_010 Hb_009897_020 Hb_009897_020 Hb_011885_010--Hb_009897_020 Hb_162074_010 Hb_162074_010 Hb_011885_010--Hb_162074_010 Hb_000488_020 Hb_000488_020 Hb_011885_010--Hb_000488_020 Hb_004800_190 Hb_004800_190 Hb_011885_010--Hb_004800_190 Hb_000225_050 Hb_000225_050 Hb_011885_010--Hb_000225_050 Hb_001514_060 Hb_001514_060 Hb_011885_010--Hb_001514_060 Hb_048653_020 Hb_048653_020 Hb_138575_010--Hb_048653_020 Hb_102100_010 Hb_102100_010 Hb_138575_010--Hb_102100_010 Hb_138575_010--Hb_009897_020 Hb_138575_010--Hb_116635_010 Hb_000015_180 Hb_000015_180 Hb_138575_010--Hb_000015_180 Hb_001504_270 Hb_001504_270 Hb_138575_010--Hb_001504_270 Hb_042553_010 Hb_042553_010 Hb_116635_010--Hb_042553_010 Hb_003893_020 Hb_003893_020 Hb_116635_010--Hb_003893_020 Hb_006911_060 Hb_006911_060 Hb_116635_010--Hb_006911_060 Hb_000940_020 Hb_000940_020 Hb_116635_010--Hb_000940_020 Hb_012702_010 Hb_012702_010 Hb_116635_010--Hb_012702_010 Hb_143863_010--Hb_000960_010 Hb_136886_010 Hb_136886_010 Hb_143863_010--Hb_136886_010 Hb_143863_010--Hb_090459_010 Hb_143863_010--Hb_001565_120 Hb_143863_010--Hb_000488_020 Hb_143863_010--Hb_011885_010 Hb_000960_010--Hb_136886_010 Hb_000960_010--Hb_127819_010 Hb_000960_010--Hb_090459_010 Hb_000960_010--Hb_102100_010 Hb_000960_010--Hb_000015_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.49468 22.2986 1.41882 1.59077 1.48438 1.31837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.83668 0.154601

CAGE analysis