Hb_000488_020

Information

Type -
Description -
Location Contig488: 7917-46334
Sequence    

Annotation

kegg
ID rcu:RCOM_0731700
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_012066927.1
description PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Jatropha curcas]
swissprot
ID U3UA11
description UDP-glucose iridoid glucosyltransferase OS=Catharanthus roseus GN=UGT76A2 PE=1 SV=1
trembl
ID A0A067L167
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02897 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 76e2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45085: 40249-41210
cDNA
(Sanger)
(ID:Location)		 024_D05.ab1: 19476-19900

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000488_020 0.0 - - PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Jatropha curcas]
2 Hb_001514_060 0.1657629653 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]
3 Hb_011885_010 0.1709223328 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
4 Hb_004800_190 0.1837938632 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 4 [Jatropha curcas]
5 Hb_143863_010 0.1993064231 - - PREDICTED: uncharacterized protein LOC105113187 isoform X2 [Populus euphratica]
6 Hb_009897_020 0.205541643 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
7 Hb_000540_010 0.211189807 - - PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
8 Hb_162074_010 0.2181462743 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
9 Hb_138575_010 0.2283348401 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
10 Hb_008864_080 0.2291942401 - - PREDICTED: uncharacterized protein LOC105631804 [Jatropha curcas]
11 Hb_003494_060 0.2407178201 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
12 Hb_151671_010 0.2422623147 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
13 Hb_001258_150 0.2433746254 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
14 Hb_102100_010 0.2440246625 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
15 Hb_002686_400 0.2445116486 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
16 Hb_000991_050 0.2459236832 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
17 Hb_002843_220 0.2463104996 - - PREDICTED: small heat shock protein, chloroplastic [Jatropha curcas]
18 Hb_001141_360 0.2469925146 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
19 Hb_004631_130 0.248633998 - - helicase domain-containing family protein [Populus trichocarpa]
20 Hb_154471_010 0.2487066089 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]

Gene co-expression network

sample Hb_000488_020 Hb_000488_020 Hb_001514_060 Hb_001514_060 Hb_000488_020--Hb_001514_060 Hb_011885_010 Hb_011885_010 Hb_000488_020--Hb_011885_010 Hb_004800_190 Hb_004800_190 Hb_000488_020--Hb_004800_190 Hb_143863_010 Hb_143863_010 Hb_000488_020--Hb_143863_010 Hb_009897_020 Hb_009897_020 Hb_000488_020--Hb_009897_020 Hb_000540_010 Hb_000540_010 Hb_000488_020--Hb_000540_010 Hb_162074_010 Hb_162074_010 Hb_001514_060--Hb_162074_010 Hb_001514_060--Hb_009897_020 Hb_004648_070 Hb_004648_070 Hb_001514_060--Hb_004648_070 Hb_000732_080 Hb_000732_080 Hb_001514_060--Hb_000732_080 Hb_002760_040 Hb_002760_040 Hb_001514_060--Hb_002760_040 Hb_011885_010--Hb_009897_020 Hb_011885_010--Hb_162074_010 Hb_011885_010--Hb_004800_190 Hb_000225_050 Hb_000225_050 Hb_011885_010--Hb_000225_050 Hb_011885_010--Hb_001514_060 Hb_004800_190--Hb_009897_020 Hb_001141_360 Hb_001141_360 Hb_004800_190--Hb_001141_360 Hb_003849_260 Hb_003849_260 Hb_004800_190--Hb_003849_260 Hb_001865_060 Hb_001865_060 Hb_004800_190--Hb_001865_060 Hb_004800_190--Hb_162074_010 Hb_003494_060 Hb_003494_060 Hb_004800_190--Hb_003494_060 Hb_000960_010 Hb_000960_010 Hb_143863_010--Hb_000960_010 Hb_136886_010 Hb_136886_010 Hb_143863_010--Hb_136886_010 Hb_090459_010 Hb_090459_010 Hb_143863_010--Hb_090459_010 Hb_001565_120 Hb_001565_120 Hb_143863_010--Hb_001565_120 Hb_143863_010--Hb_011885_010 Hb_009897_020--Hb_162074_010 Hb_009897_020--Hb_002760_040 Hb_009897_020--Hb_001865_060 Hb_002686_400 Hb_002686_400 Hb_009897_020--Hb_002686_400 Hb_009897_020--Hb_001141_360 Hb_000540_010--Hb_001514_060 Hb_001079_030 Hb_001079_030 Hb_000540_010--Hb_001079_030 Hb_078160_010 Hb_078160_010 Hb_000540_010--Hb_078160_010 Hb_000659_020 Hb_000659_020 Hb_000540_010--Hb_000659_020 Hb_000991_050 Hb_000991_050 Hb_000540_010--Hb_000991_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0857453 1.15584 0.0787617 0.0580849 0.316994 0.0472218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0175085 0.013779 0.026524 0.0572588 0.103604

CAGE analysis