Hb_011609_060

Information

Type -
Description -
Location Contig11609: 60072-62980
Sequence    

Annotation

kegg
ID rcu:RCOM_1725340
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_012077971.1
description PREDICTED: cytokinin hydroxylase [Jatropha curcas]
swissprot
ID Q9FF18
description Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A1 PE=1 SV=1
trembl
ID B9RSK4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1725340 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytokinin hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04953: 61249-61419
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011609_060 0.0 - - PREDICTED: cytokinin hydroxylase [Jatropha curcas]
2 Hb_092044_010 0.0633483055 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
3 Hb_000984_120 0.0688696202 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_005040_010 0.0919418783 - - hypothetical protein RCOM_1110360 [Ricinus communis]
5 Hb_165552_020 0.0930715886 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_170979_010 0.1060732849 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
7 Hb_012753_100 0.1078513297 - - conserved hypothetical protein [Ricinus communis]
8 Hb_021485_010 0.1080537149 - - Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao]
9 Hb_008289_020 0.1080908802 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
10 Hb_004961_010 0.1081654691 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
11 Hb_085910_010 0.1088339967 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
12 Hb_015183_050 0.1094032196 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
13 Hb_081065_010 0.1106129989 - - hypothetical protein PHAVU_001G084100g, partial [Phaseolus vulgaris]
14 Hb_000318_320 0.1144744848 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
15 Hb_005366_030 0.1145453562 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
16 Hb_019135_030 0.1151042275 - - putative mitogen-activated protein kinase 1 [Populus trichocarpa]
17 Hb_081287_010 0.1156451769 - - PREDICTED: alpha-dioxygenase 2 [Jatropha curcas]
18 Hb_110587_010 0.1167746032 - - unnamed protein product [Coffea canephora]
19 Hb_010028_010 0.117339082 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
20 Hb_135513_010 0.1181584659 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_011609_060 Hb_011609_060 Hb_092044_010 Hb_092044_010 Hb_011609_060--Hb_092044_010 Hb_000984_120 Hb_000984_120 Hb_011609_060--Hb_000984_120 Hb_005040_010 Hb_005040_010 Hb_011609_060--Hb_005040_010 Hb_165552_020 Hb_165552_020 Hb_011609_060--Hb_165552_020 Hb_170979_010 Hb_170979_010 Hb_011609_060--Hb_170979_010 Hb_012753_100 Hb_012753_100 Hb_011609_060--Hb_012753_100 Hb_092044_010--Hb_170979_010 Hb_092044_010--Hb_000984_120 Hb_010028_010 Hb_010028_010 Hb_092044_010--Hb_010028_010 Hb_007235_040 Hb_007235_040 Hb_092044_010--Hb_007235_040 Hb_000206_280 Hb_000206_280 Hb_092044_010--Hb_000206_280 Hb_000984_120--Hb_170979_010 Hb_091826_010 Hb_091826_010 Hb_000984_120--Hb_091826_010 Hb_000318_320 Hb_000318_320 Hb_000984_120--Hb_000318_320 Hb_085910_010 Hb_085910_010 Hb_000984_120--Hb_085910_010 Hb_006590_030 Hb_006590_030 Hb_005040_010--Hb_006590_030 Hb_005040_010--Hb_165552_020 Hb_001957_050 Hb_001957_050 Hb_005040_010--Hb_001957_050 Hb_002420_030 Hb_002420_030 Hb_005040_010--Hb_002420_030 Hb_039410_010 Hb_039410_010 Hb_005040_010--Hb_039410_010 Hb_165552_020--Hb_002420_030 Hb_007728_010 Hb_007728_010 Hb_165552_020--Hb_007728_010 Hb_010573_030 Hb_010573_030 Hb_165552_020--Hb_010573_030 Hb_010012_020 Hb_010012_020 Hb_165552_020--Hb_010012_020 Hb_009393_010 Hb_009393_010 Hb_170979_010--Hb_009393_010 Hb_023502_010 Hb_023502_010 Hb_170979_010--Hb_023502_010 Hb_170979_010--Hb_000206_280 Hb_021485_010 Hb_021485_010 Hb_012753_100--Hb_021485_010 Hb_008289_020 Hb_008289_020 Hb_012753_100--Hb_008289_020 Hb_012753_100--Hb_085910_010 Hb_004961_010 Hb_004961_010 Hb_012753_100--Hb_004961_010 Hb_015183_050 Hb_015183_050 Hb_012753_100--Hb_015183_050 Hb_081065_010 Hb_081065_010 Hb_012753_100--Hb_081065_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0263344 13.4152 0.422124 7.8718 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0443823 0.00941228 0

CAGE analysis