Hb_009193_020

Information

Type -
Description -
Location Contig9193: 10444-14907
Sequence    

Annotation

kegg
ID pop:POPTR_0010s16630g
description POPTRDRAFT_566934; hydrolase family protein
nr
ID XP_012067767.1
description PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
swissprot
ID O05235
description Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1
trembl
ID A0A067KYS9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15704 PE=4 SV=1
Gene Ontology
ID GO:0016787
description monoacylglycerol lipase abhd6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62322: 10507-13935 , PASA_asmbl_62323: 11846-14893
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009193_020 0.0 - - PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
2 Hb_000625_080 0.0538133607 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
3 Hb_005276_080 0.0635132001 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Jatropha curcas]
4 Hb_000676_320 0.0662617023 - - MADS-box transcription factor, partial [Clutia sp. DAV B80.252/F1980.8371]
5 Hb_013726_060 0.0679587025 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
6 Hb_000510_180 0.0682336685 - - unknown [Lotus japonicus]
7 Hb_001717_060 0.0691606827 - - PREDICTED: xylogen-like protein 11 [Gossypium raimondii]
8 Hb_001006_160 0.073452797 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
9 Hb_000531_100 0.0749660159 - - Photosystem I reaction center subunit III, chloroplast precursor, putative [Ricinus communis]
10 Hb_005754_050 0.0777582189 - - PREDICTED: uncharacterized protein LOC105636679 [Jatropha curcas]
11 Hb_002592_040 0.0783501642 - - ACC oxidase 3 [Hevea brasiliensis]
12 Hb_001710_010 0.0811357105 - - Uncharacterized protein TCM_001832 [Theobroma cacao]
13 Hb_003038_060 0.0818827605 - - hypothetical protein POPTR_0007s13050g [Populus trichocarpa]
14 Hb_007101_120 0.0823710339 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
15 Hb_000083_180 0.0833597601 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
16 Hb_001751_050 0.0834959841 - - PREDICTED: phytol kinase 1, chloroplastic [Jatropha curcas]
17 Hb_000985_150 0.0839548342 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
18 Hb_000948_240 0.0844682042 - - conserved hypothetical protein [Ricinus communis]
19 Hb_020805_050 0.0854373143 - - PREDICTED: MLO-like protein 9 [Jatropha curcas]
20 Hb_003050_380 0.0881688899 - - hypothetical protein POPTR_0007s03380g [Populus trichocarpa]

Gene co-expression network

sample Hb_009193_020 Hb_009193_020 Hb_000625_080 Hb_000625_080 Hb_009193_020--Hb_000625_080 Hb_005276_080 Hb_005276_080 Hb_009193_020--Hb_005276_080 Hb_000676_320 Hb_000676_320 Hb_009193_020--Hb_000676_320 Hb_013726_060 Hb_013726_060 Hb_009193_020--Hb_013726_060 Hb_000510_180 Hb_000510_180 Hb_009193_020--Hb_000510_180 Hb_001717_060 Hb_001717_060 Hb_009193_020--Hb_001717_060 Hb_000625_080--Hb_000510_180 Hb_008013_020 Hb_008013_020 Hb_000625_080--Hb_008013_020 Hb_000625_080--Hb_001717_060 Hb_000977_250 Hb_000977_250 Hb_000625_080--Hb_000977_250 Hb_006573_110 Hb_006573_110 Hb_000625_080--Hb_006573_110 Hb_001006_160 Hb_001006_160 Hb_005276_080--Hb_001006_160 Hb_006665_020 Hb_006665_020 Hb_005276_080--Hb_006665_020 Hb_000531_100 Hb_000531_100 Hb_005276_080--Hb_000531_100 Hb_000450_050 Hb_000450_050 Hb_005276_080--Hb_000450_050 Hb_000589_340 Hb_000589_340 Hb_005276_080--Hb_000589_340 Hb_005276_080--Hb_000676_320 Hb_000083_180 Hb_000083_180 Hb_000676_320--Hb_000083_180 Hb_000676_320--Hb_001006_160 Hb_000676_320--Hb_000450_050 Hb_003020_120 Hb_003020_120 Hb_000676_320--Hb_003020_120 Hb_013726_060--Hb_000531_100 Hb_146225_020 Hb_146225_020 Hb_013726_060--Hb_146225_020 Hb_000719_030 Hb_000719_030 Hb_013726_060--Hb_000719_030 Hb_013726_060--Hb_001717_060 Hb_001766_160 Hb_001766_160 Hb_013726_060--Hb_001766_160 Hb_002529_120 Hb_002529_120 Hb_013726_060--Hb_002529_120 Hb_000510_180--Hb_013726_060 Hb_002818_110 Hb_002818_110 Hb_000510_180--Hb_002818_110 Hb_000510_180--Hb_008013_020 Hb_000510_180--Hb_006573_110 Hb_003038_060 Hb_003038_060 Hb_001717_060--Hb_003038_060 Hb_005754_050 Hb_005754_050 Hb_001717_060--Hb_005754_050 Hb_001717_060--Hb_000531_100 Hb_005280_020 Hb_005280_020 Hb_001717_060--Hb_005280_020 Hb_001717_060--Hb_002818_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.26273 17.0047 3.76141 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0340516 0.187517 0.0501785 0.128452 22.2876

CAGE analysis