Hb_008144_010

Information

Type -
Description -
Location Contig8144: 4058-18558
Sequence    

Annotation

kegg
ID rcu:RCOM_1154590
description cytochrome P450, putative (EC:1.14.13.89)
nr
ID CAN60309.1
description hypothetical protein VITISV_015004 [Vitis vinifera]
swissprot
ID Q6WNQ8
description Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1
trembl
ID A5AJI9
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015004 PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 81e8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59326: 4058-6327
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008144_010 0.0 - - hypothetical protein VITISV_015004 [Vitis vinifera]
2 Hb_001571_020 0.0964031793 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Citrus sinensis]
3 Hb_009230_020 0.1396735012 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
4 Hb_072173_010 0.1565424895 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
5 Hb_131320_010 0.1617601272 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
6 Hb_110782_010 0.1659606925 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
7 Hb_009848_060 0.177917357 - - unknown [Glycine max]
8 Hb_008834_010 0.1812803863 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
9 Hb_001856_280 0.1825219353 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_000600_080 0.183885482 - - -
11 Hb_020400_010 0.1867090158 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
12 Hb_001519_240 0.1869210788 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_029727_010 0.1885153086 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_007676_060 0.1887980265 - - PREDICTED: cellulose synthase-like protein E2 [Pyrus x bretschneideri]
15 Hb_001288_050 0.1891427665 - - -
16 Hb_000137_060 0.1898177631 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
17 Hb_169514_010 0.1905645157 - - PREDICTED: uncharacterized protein LOC103331076 [Prunus mume]
18 Hb_001005_040 0.1917045927 - - -
19 Hb_030885_010 0.1923207139 - - -
20 Hb_006651_010 0.192416917 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]

Gene co-expression network

sample Hb_008144_010 Hb_008144_010 Hb_001571_020 Hb_001571_020 Hb_008144_010--Hb_001571_020 Hb_009230_020 Hb_009230_020 Hb_008144_010--Hb_009230_020 Hb_072173_010 Hb_072173_010 Hb_008144_010--Hb_072173_010 Hb_131320_010 Hb_131320_010 Hb_008144_010--Hb_131320_010 Hb_110782_010 Hb_110782_010 Hb_008144_010--Hb_110782_010 Hb_009848_060 Hb_009848_060 Hb_008144_010--Hb_009848_060 Hb_001288_050 Hb_001288_050 Hb_001571_020--Hb_001288_050 Hb_001597_090 Hb_001597_090 Hb_001571_020--Hb_001597_090 Hb_001005_040 Hb_001005_040 Hb_001571_020--Hb_001005_040 Hb_000465_180 Hb_000465_180 Hb_001571_020--Hb_000465_180 Hb_001571_020--Hb_009230_020 Hb_001519_240 Hb_001519_240 Hb_009230_020--Hb_001519_240 Hb_002122_050 Hb_002122_050 Hb_009230_020--Hb_002122_050 Hb_007676_060 Hb_007676_060 Hb_009230_020--Hb_007676_060 Hb_000137_060 Hb_000137_060 Hb_009230_020--Hb_000137_060 Hb_000600_080 Hb_000600_080 Hb_072173_010--Hb_000600_080 Hb_000101_320 Hb_000101_320 Hb_072173_010--Hb_000101_320 Hb_000685_140 Hb_000685_140 Hb_072173_010--Hb_000685_140 Hb_008834_010 Hb_008834_010 Hb_072173_010--Hb_008834_010 Hb_002733_050 Hb_002733_050 Hb_072173_010--Hb_002733_050 Hb_114121_010 Hb_114121_010 Hb_072173_010--Hb_114121_010 Hb_000675_040 Hb_000675_040 Hb_131320_010--Hb_000675_040 Hb_131320_010--Hb_072173_010 Hb_131320_010--Hb_000600_080 Hb_145211_010 Hb_145211_010 Hb_131320_010--Hb_145211_010 Hb_129046_010 Hb_129046_010 Hb_131320_010--Hb_129046_010 Hb_020400_010 Hb_020400_010 Hb_110782_010--Hb_020400_010 Hb_014967_010 Hb_014967_010 Hb_110782_010--Hb_014967_010 Hb_159404_010 Hb_159404_010 Hb_110782_010--Hb_159404_010 Hb_110782_010--Hb_002733_050 Hb_006013_030 Hb_006013_030 Hb_110782_010--Hb_006013_030 Hb_169514_010 Hb_169514_010 Hb_110782_010--Hb_169514_010 Hb_000260_730 Hb_000260_730 Hb_009848_060--Hb_000260_730 Hb_002016_130 Hb_002016_130 Hb_009848_060--Hb_002016_130 Hb_030885_010 Hb_030885_010 Hb_009848_060--Hb_030885_010 Hb_004052_060 Hb_004052_060 Hb_009848_060--Hb_004052_060 Hb_009848_050 Hb_009848_050 Hb_009848_060--Hb_009848_050 Hb_000574_030 Hb_000574_030 Hb_009848_060--Hb_000574_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.7356 3.51222 3.91411 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0525262 0.0137774 0 59.1332 66.11

CAGE analysis