Hb_007904_030

Information

Type -
Description -
Location Contig7904: 14740-22410
Sequence    

Annotation

kegg
ID pop:POPTR_0010s06250g
description POPTRDRAFT_726156; hypothetical protein
nr
ID XP_012085568.1
description PREDICTED: nuclear mitotic apparatus protein 1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JS98
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17885 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58302: 14683-16033 , PASA_asmbl_58303: 16821-17464 , PASA_asmbl_58305: 18178-18570 , PASA_asmbl_58306: 18571-19437 , PASA_asmbl_58307: 19539-22400
cDNA
(Sanger)
(ID:Location)		 003_K07.ab1: 14683-15676

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007904_030 0.0 - - PREDICTED: nuclear mitotic apparatus protein 1 [Jatropha curcas]
2 Hb_000853_210 0.0790110997 - - PREDICTED: uncharacterized protein LOC105642575 isoform X1 [Jatropha curcas]
3 Hb_000684_250 0.0793148436 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
4 Hb_004228_010 0.0809195162 - - PREDICTED: BEACH domain-containing protein lvsA [Jatropha curcas]
5 Hb_000878_180 0.0813789099 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Jatropha curcas]
6 Hb_004676_010 0.0822650383 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
7 Hb_002025_060 0.0858911619 - - PREDICTED: pentatricopeptide repeat-containing protein At1g73400, mitochondrial [Jatropha curcas]
8 Hb_012395_140 0.086545329 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
9 Hb_000395_070 0.0866773846 - - PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Jatropha curcas]
10 Hb_007062_020 0.0869767606 - - gcn4-complementing protein, putative [Ricinus communis]
11 Hb_000960_100 0.087309419 - - PREDICTED: uncharacterized protein At1g51745 [Jatropha curcas]
12 Hb_001329_140 0.0874430744 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
13 Hb_002235_300 0.0882197132 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
14 Hb_027380_140 0.0886943819 - - PREDICTED: uncharacterized protein LOC105634023 isoform X1 [Jatropha curcas]
15 Hb_004306_080 0.091113994 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
16 Hb_002081_010 0.0921589716 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001235_230 0.0924423728 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
18 Hb_000556_220 0.0925252676 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
19 Hb_002329_040 0.0926115348 - - PREDICTED: uncharacterized protein LOC105648065 [Jatropha curcas]
20 Hb_000696_050 0.0928927979 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]

Gene co-expression network

sample Hb_007904_030 Hb_007904_030 Hb_000853_210 Hb_000853_210 Hb_007904_030--Hb_000853_210 Hb_000684_250 Hb_000684_250 Hb_007904_030--Hb_000684_250 Hb_004228_010 Hb_004228_010 Hb_007904_030--Hb_004228_010 Hb_000878_180 Hb_000878_180 Hb_007904_030--Hb_000878_180 Hb_004676_010 Hb_004676_010 Hb_007904_030--Hb_004676_010 Hb_002025_060 Hb_002025_060 Hb_007904_030--Hb_002025_060 Hb_000796_040 Hb_000796_040 Hb_000853_210--Hb_000796_040 Hb_000009_600 Hb_000009_600 Hb_000853_210--Hb_000009_600 Hb_034432_030 Hb_034432_030 Hb_000853_210--Hb_034432_030 Hb_000853_210--Hb_004228_010 Hb_004306_080 Hb_004306_080 Hb_000853_210--Hb_004306_080 Hb_001329_140 Hb_001329_140 Hb_000684_250--Hb_001329_140 Hb_003168_110 Hb_003168_110 Hb_000684_250--Hb_003168_110 Hb_002235_300 Hb_002235_300 Hb_000684_250--Hb_002235_300 Hb_009767_080 Hb_009767_080 Hb_000684_250--Hb_009767_080 Hb_002253_080 Hb_002253_080 Hb_000684_250--Hb_002253_080 Hb_002267_140 Hb_002267_140 Hb_000684_250--Hb_002267_140 Hb_004228_010--Hb_004306_080 Hb_004228_010--Hb_000796_040 Hb_014267_010 Hb_014267_010 Hb_004228_010--Hb_014267_010 Hb_001472_090 Hb_001472_090 Hb_004228_010--Hb_001472_090 Hb_010417_050 Hb_010417_050 Hb_004228_010--Hb_010417_050 Hb_002493_020 Hb_002493_020 Hb_004228_010--Hb_002493_020 Hb_000878_180--Hb_002025_060 Hb_002615_090 Hb_002615_090 Hb_000878_180--Hb_002615_090 Hb_000680_090 Hb_000680_090 Hb_000878_180--Hb_000680_090 Hb_000878_180--Hb_002235_300 Hb_009615_170 Hb_009615_170 Hb_000878_180--Hb_009615_170 Hb_000084_250 Hb_000084_250 Hb_000878_180--Hb_000084_250 Hb_000579_230 Hb_000579_230 Hb_004676_010--Hb_000579_230 Hb_012395_140 Hb_012395_140 Hb_004676_010--Hb_012395_140 Hb_000703_150 Hb_000703_150 Hb_004676_010--Hb_000703_150 Hb_004676_010--Hb_009615_170 Hb_000395_070 Hb_000395_070 Hb_004676_010--Hb_000395_070 Hb_001754_040 Hb_001754_040 Hb_004676_010--Hb_001754_040 Hb_002025_060--Hb_000084_250 Hb_002025_060--Hb_002235_300 Hb_008695_110 Hb_008695_110 Hb_002025_060--Hb_008695_110 Hb_002025_060--Hb_000680_090 Hb_001767_140 Hb_001767_140 Hb_002025_060--Hb_001767_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.3059 13.1327 7.19051 8.92273 12.7965 14.3209
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.51709 4.02676 13.7324 11.0376 11.8225

CAGE analysis