Hb_005183_080

Information

Type -
Description -
Location Contig5183: 70884-72197
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005183_080 0.0 - - -
2 Hb_011985_020 0.1800134065 - - PREDICTED: phospholipase A1-Igamma3, chloroplastic [Jatropha curcas]
3 Hb_012553_030 0.1876591398 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_000468_050 0.1910273053 - - -
5 Hb_000090_020 0.1913810691 - - acyltransferase, putative [Ricinus communis]
6 Hb_000504_100 0.1927321134 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009225_070 0.1984454691 - - tonoplast intrinsic protein, putative [Ricinus communis]
8 Hb_004785_170 0.199796684 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
9 Hb_103541_010 0.200079488 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
10 Hb_000369_050 0.2009374771 - - Ankyrin repeat family protein, putative [Theobroma cacao]
11 Hb_000732_100 0.2013267124 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
12 Hb_015884_010 0.2017028781 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
13 Hb_114733_010 0.2017244926 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
14 Hb_000983_110 0.202348228 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
15 Hb_000714_070 0.2038782501 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
16 Hb_000477_010 0.2055277514 - - PREDICTED: potassium channel AKT1-like [Jatropha curcas]
17 Hb_000563_570 0.2065579991 - - hypothetical protein JCGZ_18895 [Jatropha curcas]
18 Hb_001318_230 0.2068691318 - - Boron transporter, putative [Ricinus communis]
19 Hb_000692_230 0.2072487825 - - phospholipase d delta, putative [Ricinus communis]
20 Hb_002592_070 0.2075419002 - - hypothetical protein VITISV_020993 [Vitis vinifera]

Gene co-expression network

sample Hb_005183_080 Hb_005183_080 Hb_011985_020 Hb_011985_020 Hb_005183_080--Hb_011985_020 Hb_012553_030 Hb_012553_030 Hb_005183_080--Hb_012553_030 Hb_000468_050 Hb_000468_050 Hb_005183_080--Hb_000468_050 Hb_000090_020 Hb_000090_020 Hb_005183_080--Hb_000090_020 Hb_000504_100 Hb_000504_100 Hb_005183_080--Hb_000504_100 Hb_009225_070 Hb_009225_070 Hb_005183_080--Hb_009225_070 Hb_004785_170 Hb_004785_170 Hb_011985_020--Hb_004785_170 Hb_000816_150 Hb_000816_150 Hb_011985_020--Hb_000816_150 Hb_008948_010 Hb_008948_010 Hb_011985_020--Hb_008948_010 Hb_017700_030 Hb_017700_030 Hb_011985_020--Hb_017700_030 Hb_004450_090 Hb_004450_090 Hb_011985_020--Hb_004450_090 Hb_114733_010 Hb_114733_010 Hb_011985_020--Hb_114733_010 Hb_012553_030--Hb_000468_050 Hb_002592_070 Hb_002592_070 Hb_012553_030--Hb_002592_070 Hb_015884_010 Hb_015884_010 Hb_012553_030--Hb_015884_010 Hb_103541_010 Hb_103541_010 Hb_012553_030--Hb_103541_010 Hb_012553_030--Hb_000090_020 Hb_012553_030--Hb_009225_070 Hb_000468_050--Hb_009225_070 Hb_000468_050--Hb_000816_150 Hb_000468_050--Hb_002592_070 Hb_000453_290 Hb_000453_290 Hb_000468_050--Hb_000453_290 Hb_000468_050--Hb_004785_170 Hb_000090_020--Hb_103541_010 Hb_002598_020 Hb_002598_020 Hb_000090_020--Hb_002598_020 Hb_000537_090 Hb_000537_090 Hb_000090_020--Hb_000537_090 Hb_000732_100 Hb_000732_100 Hb_000090_020--Hb_000732_100 Hb_001318_230 Hb_001318_230 Hb_000090_020--Hb_001318_230 Hb_001856_130 Hb_001856_130 Hb_000504_100--Hb_001856_130 Hb_000714_070 Hb_000714_070 Hb_000504_100--Hb_000714_070 Hb_017549_010 Hb_017549_010 Hb_000504_100--Hb_017549_010 Hb_116091_010 Hb_116091_010 Hb_000504_100--Hb_116091_010 Hb_000120_600 Hb_000120_600 Hb_000504_100--Hb_000120_600 Hb_030827_080 Hb_030827_080 Hb_000504_100--Hb_030827_080 Hb_009225_070--Hb_002592_070 Hb_009225_070--Hb_000816_150 Hb_011314_010 Hb_011314_010 Hb_009225_070--Hb_011314_010 Hb_022693_090 Hb_022693_090 Hb_009225_070--Hb_022693_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.933273 0.157006 1.8501 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.226324 0 0 0.231837 0.30531

CAGE analysis