Hb_004970_170

Information

Type transcription factor
Description TF Family: bZIP
Location Contig4970: 132418-137399
Sequence    

Annotation

kegg
ID rcu:RCOM_1590260
description DNA binding protein, putative
nr
ID XP_012071654.1
description PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Jatropha curcas]
swissprot
ID Q9M7Q4
description ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1
trembl
ID A0A067L1G8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04255 PE=4 SV=1
Gene Ontology
ID GO:0003700
description abscisic acid-insensitive 5-like protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45560: 132453-137279 , PASA_asmbl_45561: 132517-137876
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004970_170 0.0 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Jatropha curcas]
2 Hb_004079_060 0.0779683576 - - hypothetical protein JCGZ_07228 [Jatropha curcas]
3 Hb_062226_070 0.0824065345 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4 isoform X1 [Jatropha curcas]
4 Hb_000599_190 0.0869557198 transcription factor TF Family: SNF2 DNA repair and recombination protein RAD26, putative [Ricinus communis]
5 Hb_005725_210 0.0892841847 - - PREDICTED: RNA-binding protein 1 [Jatropha curcas]
6 Hb_019863_070 0.0947127088 - - PREDICTED: regulatory-associated protein of TOR 1 isoform X1 [Jatropha curcas]
7 Hb_002818_030 0.0951918127 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
8 Hb_127743_010 0.0959356569 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
9 Hb_000672_040 0.0964124939 - - PREDICTED: ENHANCER OF AG-4 protein 2 [Jatropha curcas]
10 Hb_001157_160 0.096615404 - - PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 isoform X1 [Jatropha curcas]
11 Hb_001104_190 0.0996467466 - - PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
12 Hb_011671_410 0.1000101189 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
13 Hb_001648_020 0.1007005037 - - hypothetical protein POPTR_0007s07750g [Populus trichocarpa]
14 Hb_145022_010 0.1007204308 - - hypothetical protein JCGZ_22699 [Jatropha curcas]
15 Hb_001257_010 0.1008702742 - - PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
16 Hb_001488_180 0.1017656237 - - PREDICTED: uncharacterized protein LOC105644152 isoform X1 [Jatropha curcas]
17 Hb_000258_160 0.1018031236 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000028_130 0.1023360629 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
19 Hb_002798_070 0.1024296415 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 [Jatropha curcas]
20 Hb_006816_370 0.102701837 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105647456 [Jatropha curcas]

Gene co-expression network

sample Hb_004970_170 Hb_004970_170 Hb_004079_060 Hb_004079_060 Hb_004970_170--Hb_004079_060 Hb_062226_070 Hb_062226_070 Hb_004970_170--Hb_062226_070 Hb_000599_190 Hb_000599_190 Hb_004970_170--Hb_000599_190 Hb_005725_210 Hb_005725_210 Hb_004970_170--Hb_005725_210 Hb_019863_070 Hb_019863_070 Hb_004970_170--Hb_019863_070 Hb_002818_030 Hb_002818_030 Hb_004970_170--Hb_002818_030 Hb_001999_290 Hb_001999_290 Hb_004079_060--Hb_001999_290 Hb_004079_060--Hb_062226_070 Hb_000473_110 Hb_000473_110 Hb_004079_060--Hb_000473_110 Hb_000258_160 Hb_000258_160 Hb_004079_060--Hb_000258_160 Hb_000174_270 Hb_000174_270 Hb_004079_060--Hb_000174_270 Hb_003494_020 Hb_003494_020 Hb_004079_060--Hb_003494_020 Hb_062226_070--Hb_003494_020 Hb_000028_130 Hb_000028_130 Hb_062226_070--Hb_000028_130 Hb_062226_070--Hb_000174_270 Hb_062226_070--Hb_001999_290 Hb_005582_040 Hb_005582_040 Hb_062226_070--Hb_005582_040 Hb_002007_160 Hb_002007_160 Hb_000599_190--Hb_002007_160 Hb_145022_010 Hb_145022_010 Hb_000599_190--Hb_145022_010 Hb_001104_190 Hb_001104_190 Hb_000599_190--Hb_001104_190 Hb_004705_020 Hb_004705_020 Hb_000599_190--Hb_004705_020 Hb_001217_050 Hb_001217_050 Hb_000599_190--Hb_001217_050 Hb_009767_080 Hb_009767_080 Hb_000599_190--Hb_009767_080 Hb_002798_070 Hb_002798_070 Hb_005725_210--Hb_002798_070 Hb_000442_010 Hb_000442_010 Hb_005725_210--Hb_000442_010 Hb_003030_060 Hb_003030_060 Hb_005725_210--Hb_003030_060 Hb_004916_010 Hb_004916_010 Hb_005725_210--Hb_004916_010 Hb_005725_210--Hb_002818_030 Hb_001828_130 Hb_001828_130 Hb_005725_210--Hb_001828_130 Hb_019863_070--Hb_002818_030 Hb_003849_110 Hb_003849_110 Hb_019863_070--Hb_003849_110 Hb_000868_090 Hb_000868_090 Hb_019863_070--Hb_000868_090 Hb_005054_110 Hb_005054_110 Hb_019863_070--Hb_005054_110 Hb_019863_070--Hb_000258_160 Hb_015807_150 Hb_015807_150 Hb_019863_070--Hb_015807_150 Hb_002818_030--Hb_004916_010 Hb_002818_030--Hb_003849_110 Hb_000049_260 Hb_000049_260 Hb_002818_030--Hb_000049_260 Hb_002818_030--Hb_002798_070 Hb_000069_310 Hb_000069_310 Hb_002818_030--Hb_000069_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.71045 28.3984 10.6322 13.3271 14.7839 14.2583
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.4929 21.3209 14.7191 15.1425 23.8772

CAGE analysis