Hb_004965_070

Information

Type -
Description -
Location Contig4965: 103786-111491
Sequence    

Annotation

kegg
ID pmum:103339258
description UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
nr
ID XP_012085942.1
description PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Jatropha curcas]
swissprot
ID P0CD61
description UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Dictyostelium discoideum GN=alg7 PE=3 SV=1
trembl
ID A0A067JQI3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22447 PE=4 SV=1
Gene Ontology
ID GO:0016021
description udp-n-acetylglucosamine--dolichyl-phosphate n-acetylglucosaminephosphotransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45487: 104051-111365 , PASA_asmbl_45490: 105097-105634
cDNA
(Sanger)
(ID:Location)		 035_O01.ab1: 106056-111365

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004965_070 0.0 - - PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Jatropha curcas]
2 Hb_003732_010 0.1064351405 - - hypothetical protein CHLNCDRAFT_58243 [Chlorella variabilis]
3 Hb_000700_130 0.1300435077 - - PREDICTED: uncharacterized protein At4g13200, chloroplastic [Jatropha curcas]
4 Hb_000340_260 0.1355527146 - - Auxin-binding protein T85 precursor, putative [Ricinus communis]
5 Hb_001832_010 0.1449737727 - - PREDICTED: uncharacterized protein LOC105637890 isoform X1 [Jatropha curcas]
6 Hb_117134_010 0.1479368002 - - PREDICTED: 14 kDa zinc-binding protein isoform X1 [Jatropha curcas]
7 Hb_004738_010 0.1485144693 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
8 Hb_000317_410 0.1489712789 - - PREDICTED: UDP-glycosyltransferase 73C5-like [Jatropha curcas]
9 Hb_148209_120 0.1520849193 - - hypothetical protein CISIN_1g032846mg [Citrus sinensis]
10 Hb_002119_120 0.1531387427 - - PREDICTED: anthranilate synthase beta subunit 1, chloroplastic-like [Jatropha curcas]
11 Hb_001688_020 0.1546309582 - - PREDICTED: uncharacterized protein LOC103438026 [Malus domestica]
12 Hb_003408_020 0.1591980089 - - hypothetical protein RCOM_0453040 [Ricinus communis]
13 Hb_000053_100 0.1595218988 - - PREDICTED: uncharacterized protein LOC105642071 [Jatropha curcas]
14 Hb_001863_480 0.1600434844 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]
15 Hb_004650_100 0.1600941583 - - Ubiquitin-fold modifier 1 precursor, putative [Ricinus communis]
16 Hb_030565_130 0.1610524496 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
17 Hb_000061_320 0.1612250038 - - PREDICTED: uncharacterized protein LOC105640575 isoform X1 [Jatropha curcas]
18 Hb_007002_030 0.1616767583 - - PREDICTED: transmembrane protein 205 [Jatropha curcas]
19 Hb_000123_170 0.162213405 - - Rab3 [Hevea brasiliensis]
20 Hb_157022_020 0.1630301891 - - nicotinamide mononucleotide adenylyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_004965_070 Hb_004965_070 Hb_003732_010 Hb_003732_010 Hb_004965_070--Hb_003732_010 Hb_000700_130 Hb_000700_130 Hb_004965_070--Hb_000700_130 Hb_000340_260 Hb_000340_260 Hb_004965_070--Hb_000340_260 Hb_001832_010 Hb_001832_010 Hb_004965_070--Hb_001832_010 Hb_117134_010 Hb_117134_010 Hb_004965_070--Hb_117134_010 Hb_004738_010 Hb_004738_010 Hb_004965_070--Hb_004738_010 Hb_001833_110 Hb_001833_110 Hb_003732_010--Hb_001833_110 Hb_001360_050 Hb_001360_050 Hb_003732_010--Hb_001360_050 Hb_003732_010--Hb_117134_010 Hb_004724_340 Hb_004724_340 Hb_003732_010--Hb_004724_340 Hb_000053_100 Hb_000053_100 Hb_003732_010--Hb_000053_100 Hb_000922_270 Hb_000922_270 Hb_000700_130--Hb_000922_270 Hb_000174_070 Hb_000174_070 Hb_000700_130--Hb_000174_070 Hb_003408_020 Hb_003408_020 Hb_000700_130--Hb_003408_020 Hb_001863_480 Hb_001863_480 Hb_000700_130--Hb_001863_480 Hb_002235_400 Hb_002235_400 Hb_000700_130--Hb_002235_400 Hb_000340_260--Hb_001832_010 Hb_000340_260--Hb_004724_340 Hb_000212_350 Hb_000212_350 Hb_000340_260--Hb_000212_350 Hb_000696_340 Hb_000696_340 Hb_000340_260--Hb_000696_340 Hb_000061_320 Hb_000061_320 Hb_000340_260--Hb_000061_320 Hb_000340_260--Hb_117134_010 Hb_001832_010--Hb_001833_110 Hb_015807_040 Hb_015807_040 Hb_001832_010--Hb_015807_040 Hb_000668_040 Hb_000668_040 Hb_001832_010--Hb_000668_040 Hb_001832_010--Hb_004724_340 Hb_001832_010--Hb_001360_050 Hb_004837_140 Hb_004837_140 Hb_001832_010--Hb_004837_140 Hb_005398_030 Hb_005398_030 Hb_117134_010--Hb_005398_030 Hb_000496_060 Hb_000496_060 Hb_117134_010--Hb_000496_060 Hb_117134_010--Hb_000061_320 Hb_117134_010--Hb_001833_110 Hb_005432_030 Hb_005432_030 Hb_117134_010--Hb_005432_030 Hb_071130_030 Hb_071130_030 Hb_117134_010--Hb_071130_030 Hb_002119_120 Hb_002119_120 Hb_004738_010--Hb_002119_120 Hb_004738_010--Hb_001863_480 Hb_000907_090 Hb_000907_090 Hb_004738_010--Hb_000907_090 Hb_001439_170 Hb_001439_170 Hb_004738_010--Hb_001439_170 Hb_001711_030 Hb_001711_030 Hb_004738_010--Hb_001711_030 Hb_000032_040 Hb_000032_040 Hb_004738_010--Hb_000032_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.6489 3.35223 6.14061 9.51689 18.3439 22.1809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
92.8199 30.363 37.4944 23.4076 19.8387

CAGE analysis