Hb_004374_150

Information

Type -
Description -
Location Contig4374: 129643-132897
Sequence    

Annotation

kegg
ID pmum:103337452
description uncharacterized LOC103337452
nr
ID XP_012092553.1
description PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCI2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05298 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42514: 129707-132806 , PASA_asmbl_42515: 129756-132713
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004374_150 0.0 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
2 Hb_004701_030 0.0805253717 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
3 Hb_073171_080 0.0826161451 - - PREDICTED: MMS19 nucleotide excision repair protein homolog isoform X1 [Jatropha curcas]
4 Hb_023020_060 0.0832156629 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
5 Hb_001396_290 0.0847828381 - - hypothetical protein B456_005G166600 [Gossypium raimondii]
6 Hb_023001_020 0.0854887642 - - PREDICTED: mitochondrial succinate-fumarate transporter 1 [Jatropha curcas]
7 Hb_001474_030 0.0894775257 - - PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
8 Hb_000640_020 0.0914699214 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
9 Hb_001754_170 0.0932803329 - - PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Jatropha curcas]
10 Hb_003091_010 0.0939044924 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
11 Hb_001616_090 0.0941708808 - - PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Jatropha curcas]
12 Hb_004225_130 0.0943697037 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105628060 isoform X1 [Jatropha curcas]
13 Hb_009913_050 0.09460288 - - PREDICTED: partner of Y14 and mago-like [Jatropha curcas]
14 Hb_000211_110 0.0950166343 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Jatropha curcas]
15 Hb_000236_280 0.0958883278 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
16 Hb_002235_320 0.0970089803 - - PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform X1 [Jatropha curcas]
17 Hb_007534_040 0.0974450056 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
18 Hb_010298_020 0.097656857 - - PREDICTED: uncharacterized protein At2g02148 isoform X4 [Vitis vinifera]
19 Hb_002133_030 0.0982103252 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
20 Hb_004656_060 0.1004443426 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]

Gene co-expression network

sample Hb_004374_150 Hb_004374_150 Hb_004701_030 Hb_004701_030 Hb_004374_150--Hb_004701_030 Hb_073171_080 Hb_073171_080 Hb_004374_150--Hb_073171_080 Hb_023020_060 Hb_023020_060 Hb_004374_150--Hb_023020_060 Hb_001396_290 Hb_001396_290 Hb_004374_150--Hb_001396_290 Hb_023001_020 Hb_023001_020 Hb_004374_150--Hb_023001_020 Hb_001474_030 Hb_001474_030 Hb_004374_150--Hb_001474_030 Hb_004701_030--Hb_023001_020 Hb_004656_060 Hb_004656_060 Hb_004701_030--Hb_004656_060 Hb_003091_010 Hb_003091_010 Hb_004701_030--Hb_003091_010 Hb_004678_020 Hb_004678_020 Hb_004701_030--Hb_004678_020 Hb_005895_040 Hb_005895_040 Hb_004701_030--Hb_005895_040 Hb_000104_080 Hb_000104_080 Hb_004701_030--Hb_000104_080 Hb_000684_420 Hb_000684_420 Hb_073171_080--Hb_000684_420 Hb_004724_360 Hb_004724_360 Hb_073171_080--Hb_004724_360 Hb_000327_310 Hb_000327_310 Hb_073171_080--Hb_000327_310 Hb_000236_280 Hb_000236_280 Hb_073171_080--Hb_000236_280 Hb_073171_080--Hb_001396_290 Hb_002400_180 Hb_002400_180 Hb_073171_080--Hb_002400_180 Hb_002133_030 Hb_002133_030 Hb_023020_060--Hb_002133_030 Hb_000640_020 Hb_000640_020 Hb_023020_060--Hb_000640_020 Hb_000343_210 Hb_000343_210 Hb_023020_060--Hb_000343_210 Hb_023020_060--Hb_001396_290 Hb_003020_110 Hb_003020_110 Hb_023020_060--Hb_003020_110 Hb_000504_160 Hb_000504_160 Hb_023020_060--Hb_000504_160 Hb_000120_510 Hb_000120_510 Hb_001396_290--Hb_000120_510 Hb_004225_130 Hb_004225_130 Hb_001396_290--Hb_004225_130 Hb_002048_090 Hb_002048_090 Hb_001396_290--Hb_002048_090 Hb_001396_290--Hb_000504_160 Hb_006829_090 Hb_006829_090 Hb_001396_290--Hb_006829_090 Hb_000139_250 Hb_000139_250 Hb_023001_020--Hb_000139_250 Hb_023001_020--Hb_000104_080 Hb_000923_040 Hb_000923_040 Hb_023001_020--Hb_000923_040 Hb_023001_020--Hb_004678_020 Hb_005701_040 Hb_005701_040 Hb_023001_020--Hb_005701_040 Hb_002276_050 Hb_002276_050 Hb_001474_030--Hb_002276_050 Hb_000740_070 Hb_000740_070 Hb_001474_030--Hb_000740_070 Hb_001474_030--Hb_073171_080 Hb_001474_030--Hb_000236_280 Hb_001474_030--Hb_002133_030 Hb_001474_030--Hb_001396_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
80.6074 50.8944 29.6589 14.8607 114.776 97.8555
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
46.0386 37.7418 17.0028 22.9051 11.0303

CAGE analysis