Hb_004064_030

Information

Type -
Description -
Location Contig4064: 66432-71242
Sequence    

Annotation

kegg
ID rcu:RCOM_0566090
description aldose-1-epimerase, putative (EC:5.1.3.3)
nr
ID XP_002530475.1
description aldose-1-epimerase, putative [Ricinus communis]
swissprot
ID Q9GKX6
description Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
trembl
ID B9SWV6
description Aldose 1-epimerase OS=Ricinus communis GN=RCOM_0566090 PE=3 SV=1
Gene Ontology
ID GO:0005829
description aldose 1-epimerase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004064_030 0.0 - - aldose-1-epimerase, putative [Ricinus communis]
2 Hb_001001_050 0.2239197091 - - CXE protein [Hevea brasiliensis]
3 Hb_000668_090 0.2506409436 - - senescence-associated family protein [Populus trichocarpa]
4 Hb_000313_330 0.2705906831 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
5 Hb_002235_270 0.2888217016 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
6 Hb_067118_010 0.301839128 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
7 Hb_179645_010 0.3021877615 - - -
8 Hb_113084_010 0.3055243773 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
9 Hb_019333_010 0.3058933358 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
10 Hb_003713_010 0.3118213123 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004449_230 0.3130971553 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
12 Hb_000050_140 0.3156301308 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Populus euphratica]
13 Hb_000424_080 0.317462475 - - PREDICTED: endoglucanase 16 [Jatropha curcas]
14 Hb_000964_100 0.3186831528 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
15 Hb_000049_080 0.3241780072 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_009102_020 0.32662432 - - hypothetical protein EUGRSUZ_I01262 [Eucalyptus grandis]
17 Hb_000139_110 0.3297731112 - - PREDICTED: mavicyanin [Jatropha curcas]
18 Hb_123560_030 0.3309316954 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_000375_140 0.3317886215 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
20 Hb_000248_110 0.338716318 - - hypothetical protein VITISV_037580 [Vitis vinifera]

Gene co-expression network

sample Hb_004064_030 Hb_004064_030 Hb_001001_050 Hb_001001_050 Hb_004064_030--Hb_001001_050 Hb_000668_090 Hb_000668_090 Hb_004064_030--Hb_000668_090 Hb_000313_330 Hb_000313_330 Hb_004064_030--Hb_000313_330 Hb_002235_270 Hb_002235_270 Hb_004064_030--Hb_002235_270 Hb_067118_010 Hb_067118_010 Hb_004064_030--Hb_067118_010 Hb_179645_010 Hb_179645_010 Hb_004064_030--Hb_179645_010 Hb_000424_080 Hb_000424_080 Hb_001001_050--Hb_000424_080 Hb_001001_050--Hb_002235_270 Hb_004449_230 Hb_004449_230 Hb_001001_050--Hb_004449_230 Hb_001001_050--Hb_000668_090 Hb_000964_100 Hb_000964_100 Hb_001001_050--Hb_000964_100 Hb_001776_030 Hb_001776_030 Hb_000668_090--Hb_001776_030 Hb_003964_020 Hb_003964_020 Hb_000668_090--Hb_003964_020 Hb_000074_100 Hb_000074_100 Hb_000668_090--Hb_000074_100 Hb_004619_070 Hb_004619_070 Hb_000668_090--Hb_004619_070 Hb_000313_330--Hb_067118_010 Hb_000375_140 Hb_000375_140 Hb_000313_330--Hb_000375_140 Hb_002374_540 Hb_002374_540 Hb_000313_330--Hb_002374_540 Hb_003713_010 Hb_003713_010 Hb_000313_330--Hb_003713_010 Hb_146255_010 Hb_146255_010 Hb_000313_330--Hb_146255_010 Hb_006663_110 Hb_006663_110 Hb_000313_330--Hb_006663_110 Hb_065841_010 Hb_065841_010 Hb_002235_270--Hb_065841_010 Hb_009102_020 Hb_009102_020 Hb_002235_270--Hb_009102_020 Hb_000311_030 Hb_000311_030 Hb_002235_270--Hb_000311_030 Hb_068569_010 Hb_068569_010 Hb_002235_270--Hb_068569_010 Hb_000979_010 Hb_000979_010 Hb_002235_270--Hb_000979_010 Hb_067118_010--Hb_000375_140 Hb_006061_030 Hb_006061_030 Hb_067118_010--Hb_006061_030 Hb_067118_010--Hb_003713_010 Hb_067118_010--Hb_146255_010 Hb_067118_010--Hb_002374_540 Hb_004108_190 Hb_004108_190 Hb_179645_010--Hb_004108_190 Hb_019333_010 Hb_019333_010 Hb_179645_010--Hb_019333_010 Hb_000840_260 Hb_000840_260 Hb_179645_010--Hb_000840_260 Hb_000179_060 Hb_000179_060 Hb_179645_010--Hb_000179_060 Hb_010050_040 Hb_010050_040 Hb_179645_010--Hb_010050_040 Hb_004954_020 Hb_004954_020 Hb_179645_010--Hb_004954_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.376338 0.0569521 0.0422871 0.504635 0 0.0986411
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.190109

CAGE analysis