Hb_003813_110

Information

Type -
Description -
Location Contig3813: 69399-70013
Sequence    

Annotation

kegg
ID rcu:RCOM_1726900
description hypothetical protein
nr
ID XP_002516739.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RSM0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1726900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003813_110 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000567_290 0.0959977692 - - hypothetical protein RCOM_0303940 [Ricinus communis]
3 Hb_000661_150 0.1048538291 - - ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
4 Hb_004619_090 0.1050913942 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000441_210 0.1117734308 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
6 Hb_002311_090 0.125546289 - - PREDICTED: uncharacterized protein LOC105643503 [Jatropha curcas]
7 Hb_000418_040 0.125983813 - - hypothetical protein RCOM_0377590 [Ricinus communis]
8 Hb_101133_050 0.1261378049 - - PREDICTED: condensin complex subunit 3 [Jatropha curcas]
9 Hb_072201_010 0.1265055987 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
10 Hb_001584_360 0.1269023338 - - PREDICTED: serine/threonine-protein kinase haspin homolog hrk1 [Jatropha curcas]
11 Hb_012150_040 0.1279172461 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001699_270 0.1332748761 - - PREDICTED: uncharacterized protein LOC105628996 [Jatropha curcas]
13 Hb_001688_100 0.1363313271 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
14 Hb_021576_050 0.1400041036 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
15 Hb_001307_150 0.1407505915 - - receptor protein kinase, putative [Ricinus communis]
16 Hb_001565_090 0.1408747135 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
17 Hb_000069_650 0.1443983579 - - conserved hypothetical protein [Ricinus communis]
18 Hb_014497_070 0.1493788433 - - PREDICTED: cyclin-dependent kinase B2-2 [Jatropha curcas]
19 Hb_001410_030 0.1494139722 - - hypothetical protein JCGZ_20419 [Jatropha curcas]
20 Hb_080952_060 0.1518429349 - - PREDICTED: patellin-4 [Populus euphratica]

Gene co-expression network

sample Hb_003813_110 Hb_003813_110 Hb_000567_290 Hb_000567_290 Hb_003813_110--Hb_000567_290 Hb_000661_150 Hb_000661_150 Hb_003813_110--Hb_000661_150 Hb_004619_090 Hb_004619_090 Hb_003813_110--Hb_004619_090 Hb_000441_210 Hb_000441_210 Hb_003813_110--Hb_000441_210 Hb_002311_090 Hb_002311_090 Hb_003813_110--Hb_002311_090 Hb_000418_040 Hb_000418_040 Hb_003813_110--Hb_000418_040 Hb_000567_290--Hb_002311_090 Hb_001410_030 Hb_001410_030 Hb_000567_290--Hb_001410_030 Hb_000567_290--Hb_000418_040 Hb_101133_050 Hb_101133_050 Hb_000567_290--Hb_101133_050 Hb_000567_290--Hb_000661_150 Hb_001699_270 Hb_001699_270 Hb_000661_150--Hb_001699_270 Hb_000661_150--Hb_101133_050 Hb_001950_090 Hb_001950_090 Hb_000661_150--Hb_001950_090 Hb_001688_100 Hb_001688_100 Hb_000661_150--Hb_001688_100 Hb_000661_150--Hb_000418_040 Hb_001307_150 Hb_001307_150 Hb_000661_150--Hb_001307_150 Hb_004619_090--Hb_000418_040 Hb_004619_090--Hb_000441_210 Hb_118282_020 Hb_118282_020 Hb_004619_090--Hb_118282_020 Hb_004619_090--Hb_101133_050 Hb_001390_040 Hb_001390_040 Hb_004619_090--Hb_001390_040 Hb_004963_020 Hb_004963_020 Hb_000441_210--Hb_004963_020 Hb_004102_090 Hb_004102_090 Hb_000441_210--Hb_004102_090 Hb_010705_040 Hb_010705_040 Hb_000441_210--Hb_010705_040 Hb_001454_180 Hb_001454_180 Hb_000441_210--Hb_001454_180 Hb_002205_180 Hb_002205_180 Hb_000441_210--Hb_002205_180 Hb_001168_030 Hb_001168_030 Hb_000441_210--Hb_001168_030 Hb_002311_090--Hb_101133_050 Hb_007632_210 Hb_007632_210 Hb_002311_090--Hb_007632_210 Hb_012150_040 Hb_012150_040 Hb_002311_090--Hb_012150_040 Hb_124677_050 Hb_124677_050 Hb_002311_090--Hb_124677_050 Hb_002311_090--Hb_000661_150 Hb_000418_040--Hb_118282_020 Hb_059226_010 Hb_059226_010 Hb_000418_040--Hb_059226_010 Hb_001565_090 Hb_001565_090 Hb_000418_040--Hb_001565_090 Hb_007474_020 Hb_007474_020 Hb_000418_040--Hb_007474_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.53385 0.621293 38.5227 24.7444 0.326592 0.501503
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.973542 0.53561 0.671515 2.85137 1.18921

CAGE analysis