Hb_003777_140

Information

Type -
Description -
Location Contig3777: 219159-220805
Sequence    

Annotation

kegg
ID rcu:RCOM_0959170
description hypothetical protein
nr
ID XP_002524288.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SE69
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0959170 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003777_140 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_166718_010 0.1040685601 - - heat-shock protein, putative [Ricinus communis]
3 Hb_006831_090 0.1153352569 - - PREDICTED: uncharacterized protein LOC105642125 isoform X1 [Jatropha curcas]
4 Hb_002387_010 0.1164033336 - - PREDICTED: protein STAY-GREEN LIKE, chloroplastic [Jatropha curcas]
5 Hb_086300_010 0.1170010308 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
6 Hb_172426_070 0.1180863744 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
7 Hb_000139_360 0.1186843363 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
8 Hb_004032_280 0.1188741187 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]
9 Hb_003163_010 0.1210425095 - - hypothetical protein POPTR_0012s02920g [Populus trichocarpa]
10 Hb_000803_080 0.1224200972 desease resistance Gene Name: ABC_tran ATP-binding cassette transporter, putative [Ricinus communis]
11 Hb_000816_240 0.1235543775 - - PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic [Jatropha curcas]
12 Hb_147028_010 0.1236963576 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Prunus mume]
13 Hb_004607_110 0.1243216753 - - PREDICTED: serine/threonine-protein kinase Nek6 [Jatropha curcas]
14 Hb_002374_180 0.1244454746 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
15 Hb_008536_020 0.1246133151 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
16 Hb_002681_210 0.1261378006 - - PREDICTED: uncharacterized protein LOC105633686 [Jatropha curcas]
17 Hb_000235_040 0.1263682277 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Populus euphratica]
18 Hb_002600_170 0.1268778234 - - conserved hypothetical protein [Ricinus communis]
19 Hb_044478_010 0.1271278594 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
20 Hb_000590_110 0.1276023334 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003777_140 Hb_003777_140 Hb_166718_010 Hb_166718_010 Hb_003777_140--Hb_166718_010 Hb_006831_090 Hb_006831_090 Hb_003777_140--Hb_006831_090 Hb_002387_010 Hb_002387_010 Hb_003777_140--Hb_002387_010 Hb_086300_010 Hb_086300_010 Hb_003777_140--Hb_086300_010 Hb_172426_070 Hb_172426_070 Hb_003777_140--Hb_172426_070 Hb_000139_360 Hb_000139_360 Hb_003777_140--Hb_000139_360 Hb_004032_280 Hb_004032_280 Hb_166718_010--Hb_004032_280 Hb_000803_080 Hb_000803_080 Hb_166718_010--Hb_000803_080 Hb_008536_020 Hb_008536_020 Hb_166718_010--Hb_008536_020 Hb_002600_170 Hb_002600_170 Hb_166718_010--Hb_002600_170 Hb_166718_010--Hb_006831_090 Hb_000329_780 Hb_000329_780 Hb_166718_010--Hb_000329_780 Hb_006831_090--Hb_000329_780 Hb_006831_090--Hb_002600_170 Hb_006831_090--Hb_004032_280 Hb_002374_180 Hb_002374_180 Hb_006831_090--Hb_002374_180 Hb_006831_090--Hb_008536_020 Hb_006831_090--Hb_172426_070 Hb_002805_280 Hb_002805_280 Hb_002387_010--Hb_002805_280 Hb_004607_110 Hb_004607_110 Hb_002387_010--Hb_004607_110 Hb_008195_090 Hb_008195_090 Hb_002387_010--Hb_008195_090 Hb_044478_010 Hb_044478_010 Hb_002387_010--Hb_044478_010 Hb_029991_010 Hb_029991_010 Hb_002387_010--Hb_029991_010 Hb_003913_120 Hb_003913_120 Hb_002387_010--Hb_003913_120 Hb_147028_010 Hb_147028_010 Hb_086300_010--Hb_147028_010 Hb_020956_030 Hb_020956_030 Hb_086300_010--Hb_020956_030 Hb_003162_060 Hb_003162_060 Hb_086300_010--Hb_003162_060 Hb_028491_010 Hb_028491_010 Hb_086300_010--Hb_028491_010 Hb_005532_030 Hb_005532_030 Hb_086300_010--Hb_005532_030 Hb_033681_030 Hb_033681_030 Hb_086300_010--Hb_033681_030 Hb_003163_010 Hb_003163_010 Hb_172426_070--Hb_003163_010 Hb_001491_070 Hb_001491_070 Hb_172426_070--Hb_001491_070 Hb_172426_070--Hb_002600_170 Hb_172426_070--Hb_004032_280 Hb_172426_070--Hb_008536_020 Hb_000696_060 Hb_000696_060 Hb_000139_360--Hb_000696_060 Hb_000139_360--Hb_008195_090 Hb_000139_360--Hb_044478_010 Hb_000139_360--Hb_172426_070 Hb_000139_360--Hb_029991_010 Hb_000139_360--Hb_002387_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0107297 0.359383 0.423457 0 0.0128882
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.023232 0 0.0278019 0.681786

CAGE analysis