Hb_003494_220

Information

Type -
Description -
Location Contig3494: 216960-220190
Sequence    

Annotation

kegg
ID pop:POPTR_0017s12050g
description POPTRDRAFT_668584; hypothetical protein
nr
ID XP_012084710.1
description PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4I5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19854 PE=4 SV=1
Gene Ontology
ID GO:0005840
description PREDICTED: uncharacterized protein LOC105644073

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003494_220 0.0 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
2 Hb_000473_100 0.1216694123 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
3 Hb_010557_020 0.1217954403 - - Mlo protein [Hevea brasiliensis]
4 Hb_002284_060 0.1235238884 - - sugar transporter, putative [Ricinus communis]
5 Hb_000290_030 0.1269394699 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
6 Hb_001268_150 0.1295764645 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
7 Hb_000069_540 0.1303936044 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
8 Hb_000868_130 0.1304953068 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
9 Hb_000160_250 0.1312816341 - - Uncharacterized protein TCM_019235 [Theobroma cacao]
10 Hb_003894_180 0.1327319319 - - PREDICTED: uncharacterized protein LOC104245193, partial [Nicotiana sylvestris]
11 Hb_002151_020 0.1339019419 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
12 Hb_000922_350 0.1346407618 - - PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]
13 Hb_002095_020 0.1358226918 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
14 Hb_001269_400 0.1369965363 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
15 Hb_002902_040 0.1372662543 - - PREDICTED: peroxidase 51 [Jatropha curcas]
16 Hb_000045_080 0.1380908066 - - amino acid transporter, putative [Ricinus communis]
17 Hb_017862_030 0.1392451343 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
18 Hb_001369_390 0.1394572628 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
19 Hb_000103_300 0.1397097918 - - PREDICTED: perakine reductase-like [Jatropha curcas]
20 Hb_002902_070 0.1402800825 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]

Gene co-expression network

sample Hb_003494_220 Hb_003494_220 Hb_000473_100 Hb_000473_100 Hb_003494_220--Hb_000473_100 Hb_010557_020 Hb_010557_020 Hb_003494_220--Hb_010557_020 Hb_002284_060 Hb_002284_060 Hb_003494_220--Hb_002284_060 Hb_000290_030 Hb_000290_030 Hb_003494_220--Hb_000290_030 Hb_001268_150 Hb_001268_150 Hb_003494_220--Hb_001268_150 Hb_000069_540 Hb_000069_540 Hb_003494_220--Hb_000069_540 Hb_000868_130 Hb_000868_130 Hb_000473_100--Hb_000868_130 Hb_144449_010 Hb_144449_010 Hb_000473_100--Hb_144449_010 Hb_002902_040 Hb_002902_040 Hb_000473_100--Hb_002902_040 Hb_000473_100--Hb_000069_540 Hb_001269_400 Hb_001269_400 Hb_000473_100--Hb_001269_400 Hb_000856_200 Hb_000856_200 Hb_000473_100--Hb_000856_200 Hb_010557_020--Hb_000290_030 Hb_010557_020--Hb_000856_200 Hb_010222_040 Hb_010222_040 Hb_010557_020--Hb_010222_040 Hb_010557_020--Hb_144449_010 Hb_010557_020--Hb_000473_100 Hb_000162_200 Hb_000162_200 Hb_010557_020--Hb_000162_200 Hb_000103_300 Hb_000103_300 Hb_002284_060--Hb_000103_300 Hb_000152_570 Hb_000152_570 Hb_002284_060--Hb_000152_570 Hb_000193_070 Hb_000193_070 Hb_002284_060--Hb_000193_070 Hb_004466_090 Hb_004466_090 Hb_002284_060--Hb_004466_090 Hb_002391_240 Hb_002391_240 Hb_002284_060--Hb_002391_240 Hb_003894_180 Hb_003894_180 Hb_002284_060--Hb_003894_180 Hb_000977_030 Hb_000977_030 Hb_000290_030--Hb_000977_030 Hb_000290_030--Hb_000856_200 Hb_002724_010 Hb_002724_010 Hb_000290_030--Hb_002724_010 Hb_000160_250 Hb_000160_250 Hb_000290_030--Hb_000160_250 Hb_000290_030--Hb_000473_100 Hb_001268_150--Hb_000160_250 Hb_001206_100 Hb_001206_100 Hb_001268_150--Hb_001206_100 Hb_002942_200 Hb_002942_200 Hb_001268_150--Hb_002942_200 Hb_000364_090 Hb_000364_090 Hb_001268_150--Hb_000364_090 Hb_001268_150--Hb_002284_060 Hb_001268_150--Hb_000290_030 Hb_002902_070 Hb_002902_070 Hb_000069_540--Hb_002902_070 Hb_144703_010 Hb_144703_010 Hb_000069_540--Hb_144703_010 Hb_019496_040 Hb_019496_040 Hb_000069_540--Hb_019496_040 Hb_000069_540--Hb_000868_130 Hb_008598_010 Hb_008598_010 Hb_000069_540--Hb_008598_010 Hb_000069_540--Hb_002902_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.155187 0.182566 0.492545 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0251024 0 0 0.110113 0.332928

CAGE analysis