Hb_003125_170

Information

Type -
Description -
Location Contig3125: 123958-126225
Sequence    

Annotation

kegg
ID rcu:RCOM_1505850
description hypothetical protein
nr
ID XP_012090686.1
description PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
swissprot
ID Q9FH28
description Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2
trembl
ID A0A067JRJ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26441 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33064: 124981-125225
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003125_170 0.0 - - PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
2 Hb_000094_070 0.0771125645 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X2 [Jatropha curcas]
3 Hb_002235_200 0.0864276726 - - pattern formation protein, putative [Ricinus communis]
4 Hb_004374_110 0.087911805 - - PREDICTED: uncharacterized protein LOC105645768 [Jatropha curcas]
5 Hb_001635_120 0.0881678446 - - PREDICTED: uncharacterized protein At1g51745-like [Jatropha curcas]
6 Hb_004787_050 0.0886994072 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]
7 Hb_000181_340 0.0937465449 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
8 Hb_001157_240 0.0942686538 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Jatropha curcas]
9 Hb_032202_040 0.0969457783 - - PREDICTED: phospholipase D beta 2 [Jatropha curcas]
10 Hb_000130_490 0.099470556 - - PREDICTED: uncharacterized protein LOC105637408 isoform X2 [Jatropha curcas]
11 Hb_004712_130 0.1009964576 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
12 Hb_000008_440 0.1022009949 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Jatropha curcas]
13 Hb_001999_290 0.1023330903 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like [Jatropha curcas]
14 Hb_012632_010 0.1028338992 - - PREDICTED: uncharacterized protein LOC105640019 [Jatropha curcas]
15 Hb_000913_020 0.1032752062 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
16 Hb_000174_270 0.1034542974 - - PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X1 [Jatropha curcas]
17 Hb_012506_040 0.1045131044 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105637346 [Jatropha curcas]
18 Hb_001865_070 0.105936961 - - PREDICTED: uncharacterized protein LOC105647937 isoform X1 [Jatropha curcas]
19 Hb_000465_280 0.1064544173 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]
20 Hb_003607_070 0.1074914855 - - PREDICTED: pentatricopeptide repeat-containing protein At5g48910 [Jatropha curcas]

Gene co-expression network

sample Hb_003125_170 Hb_003125_170 Hb_000094_070 Hb_000094_070 Hb_003125_170--Hb_000094_070 Hb_002235_200 Hb_002235_200 Hb_003125_170--Hb_002235_200 Hb_004374_110 Hb_004374_110 Hb_003125_170--Hb_004374_110 Hb_001635_120 Hb_001635_120 Hb_003125_170--Hb_001635_120 Hb_004787_050 Hb_004787_050 Hb_003125_170--Hb_004787_050 Hb_000181_340 Hb_000181_340 Hb_003125_170--Hb_000181_340 Hb_004712_130 Hb_004712_130 Hb_000094_070--Hb_004712_130 Hb_000094_070--Hb_000181_340 Hb_001157_240 Hb_001157_240 Hb_000094_070--Hb_001157_240 Hb_000039_150 Hb_000039_150 Hb_000094_070--Hb_000039_150 Hb_000366_040 Hb_000366_040 Hb_000094_070--Hb_000366_040 Hb_002235_200--Hb_004374_110 Hb_003607_070 Hb_003607_070 Hb_002235_200--Hb_003607_070 Hb_006839_010 Hb_006839_010 Hb_002235_200--Hb_006839_010 Hb_140627_020 Hb_140627_020 Hb_002235_200--Hb_140627_020 Hb_000123_180 Hb_000123_180 Hb_002235_200--Hb_000123_180 Hb_004374_110--Hb_006839_010 Hb_004374_110--Hb_001157_240 Hb_012632_010 Hb_012632_010 Hb_004374_110--Hb_012632_010 Hb_002890_130 Hb_002890_130 Hb_004374_110--Hb_002890_130 Hb_001377_100 Hb_001377_100 Hb_004374_110--Hb_001377_100 Hb_000028_130 Hb_000028_130 Hb_001635_120--Hb_000028_130 Hb_000017_220 Hb_000017_220 Hb_001635_120--Hb_000017_220 Hb_005582_040 Hb_005582_040 Hb_001635_120--Hb_005582_040 Hb_000174_270 Hb_000174_270 Hb_001635_120--Hb_000174_270 Hb_001999_290 Hb_001999_290 Hb_001635_120--Hb_001999_290 Hb_001473_110 Hb_001473_110 Hb_001635_120--Hb_001473_110 Hb_003058_260 Hb_003058_260 Hb_004787_050--Hb_003058_260 Hb_001998_240 Hb_001998_240 Hb_004787_050--Hb_001998_240 Hb_002675_130 Hb_002675_130 Hb_004787_050--Hb_002675_130 Hb_007894_110 Hb_007894_110 Hb_004787_050--Hb_007894_110 Hb_003943_110 Hb_003943_110 Hb_004787_050--Hb_003943_110 Hb_004787_050--Hb_001635_120 Hb_000193_330 Hb_000193_330 Hb_000181_340--Hb_000193_330 Hb_000181_340--Hb_012632_010 Hb_062226_070 Hb_062226_070 Hb_000181_340--Hb_062226_070 Hb_000181_340--Hb_004374_110 Hb_000103_340 Hb_000103_340 Hb_000181_340--Hb_000103_340 Hb_000181_340--Hb_001999_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.52561 2.83124 1.78707 2.72795 1.64129 1.28741
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.33605 1.46871 3.64681 2.02134 3.70476

CAGE analysis