Hb_002111_050

Information

Type -
Description -
Location Contig2111: 58051-62288
Sequence    

Annotation

kegg
ID rcu:RCOM_0934420
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012081138.1
description PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
swissprot
ID Q91Z38
description Tetratricopeptide repeat protein 1 OS=Mus musculus GN=Ttc1 PE=2 SV=1
trembl
ID A0A067K5D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16990 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002111_050 0.0 - - PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
2 Hb_002659_140 0.1114307607 - - hypothetical protein JCGZ_08031 [Jatropha curcas]
3 Hb_006816_290 0.1118850694 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
4 Hb_001437_300 0.1254713847 - - -
5 Hb_011224_080 0.1258420343 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
6 Hb_000352_110 0.1280929122 - - DNA topoisomerase II, putative [Ricinus communis]
7 Hb_002226_030 0.1281040348 - - PREDICTED: high affinity nitrate transporter 2.7 [Jatropha curcas]
8 Hb_004970_200 0.1289953572 - - serine/threonine-protein kinase, putative [Ricinus communis]
9 Hb_028872_050 0.1289956926 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Jatropha curcas]
10 Hb_000329_690 0.1310661861 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
11 Hb_005333_040 0.1320291533 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
12 Hb_168918_020 0.1358809363 - - pectin acetylesterase, putative [Ricinus communis]
13 Hb_001832_190 0.1361299531 - - conserved hypothetical protein [Ricinus communis]
14 Hb_033080_010 0.1382112702 - - -
15 Hb_003055_050 0.1411512744 - - hypothetical protein POPTR_0011s04510g [Populus trichocarpa]
16 Hb_017098_030 0.1426764071 - - hypothetical protein POPTR_0001s03560g [Populus trichocarpa]
17 Hb_000345_560 0.1431431105 - - -
18 Hb_002973_080 0.1472529354 - - PREDICTED: uncharacterized protein LOC105630313 [Jatropha curcas]
19 Hb_007547_010 0.147352735 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
20 Hb_002942_020 0.1481022375 - - nucleotide binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002111_050 Hb_002111_050 Hb_002659_140 Hb_002659_140 Hb_002111_050--Hb_002659_140 Hb_006816_290 Hb_006816_290 Hb_002111_050--Hb_006816_290 Hb_001437_300 Hb_001437_300 Hb_002111_050--Hb_001437_300 Hb_011224_080 Hb_011224_080 Hb_002111_050--Hb_011224_080 Hb_000352_110 Hb_000352_110 Hb_002111_050--Hb_000352_110 Hb_002226_030 Hb_002226_030 Hb_002111_050--Hb_002226_030 Hb_002659_140--Hb_011224_080 Hb_004970_200 Hb_004970_200 Hb_002659_140--Hb_004970_200 Hb_010174_130 Hb_010174_130 Hb_002659_140--Hb_010174_130 Hb_001001_160 Hb_001001_160 Hb_002659_140--Hb_001001_160 Hb_000025_200 Hb_000025_200 Hb_002659_140--Hb_000025_200 Hb_001416_040 Hb_001416_040 Hb_006816_290--Hb_001416_040 Hb_000327_240 Hb_000327_240 Hb_006816_290--Hb_000327_240 Hb_002400_270 Hb_002400_270 Hb_006816_290--Hb_002400_270 Hb_006816_290--Hb_001001_160 Hb_007447_010 Hb_007447_010 Hb_006816_290--Hb_007447_010 Hb_004374_010 Hb_004374_010 Hb_001437_300--Hb_004374_010 Hb_017098_030 Hb_017098_030 Hb_001437_300--Hb_017098_030 Hb_000183_070 Hb_000183_070 Hb_001437_300--Hb_000183_070 Hb_006501_150 Hb_006501_150 Hb_001437_300--Hb_006501_150 Hb_007992_030 Hb_007992_030 Hb_001437_300--Hb_007992_030 Hb_001514_020 Hb_001514_020 Hb_001437_300--Hb_001514_020 Hb_006693_030 Hb_006693_030 Hb_011224_080--Hb_006693_030 Hb_000029_030 Hb_000029_030 Hb_011224_080--Hb_000029_030 Hb_002368_050 Hb_002368_050 Hb_011224_080--Hb_002368_050 Hb_168918_020 Hb_168918_020 Hb_011224_080--Hb_168918_020 Hb_000556_080 Hb_000556_080 Hb_011224_080--Hb_000556_080 Hb_002973_080 Hb_002973_080 Hb_000352_110--Hb_002973_080 Hb_001629_110 Hb_001629_110 Hb_000352_110--Hb_001629_110 Hb_000330_050 Hb_000330_050 Hb_000352_110--Hb_000330_050 Hb_007575_040 Hb_007575_040 Hb_000352_110--Hb_007575_040 Hb_000172_370 Hb_000172_370 Hb_000352_110--Hb_000172_370 Hb_010638_020 Hb_010638_020 Hb_000352_110--Hb_010638_020 Hb_000997_270 Hb_000997_270 Hb_002226_030--Hb_000997_270 Hb_101832_010 Hb_101832_010 Hb_002226_030--Hb_101832_010 Hb_000127_010 Hb_000127_010 Hb_002226_030--Hb_000127_010 Hb_000041_080 Hb_000041_080 Hb_002226_030--Hb_000041_080 Hb_003376_100 Hb_003376_100 Hb_002226_030--Hb_003376_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.2278 1.29143 2.90697 1.70144 27.8736 15.0731
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.1628 15.9817 12.7264 2.52419 8.77309

CAGE analysis