Hb_002028_060

Information

Type -
Description -
Location Contig2028: 93851-95258
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002028_060 0.0 - - -
2 Hb_002478_020 0.2373442903 - - hypothetical protein POPTR_0010s19120g [Populus trichocarpa]
3 Hb_003052_040 0.2451484629 - - conserved hypothetical protein [Ricinus communis]
4 Hb_113635_010 0.2478910746 - - -
5 Hb_003893_080 0.2484817696 - - conserved hypothetical protein [Ricinus communis]
6 Hb_039946_010 0.2529478191 - - hypothetical protein POPTR_0018s09200g [Populus trichocarpa]
7 Hb_002290_050 0.2619467948 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002099_050 0.2620714481 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001186_070 0.2654585263 - - PREDICTED: F-box protein FBW2-like [Gossypium raimondii]
10 Hb_011671_400 0.266641277 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
11 Hb_004129_150 0.266918685 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
12 Hb_148850_010 0.2684370071 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
13 Hb_003209_060 0.2693042409 - - -
14 Hb_002260_090 0.2694262579 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
15 Hb_014497_110 0.2712945441 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]
16 Hb_000979_250 0.2738408074 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000329_660 0.2757800161 - - PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic [Jatropha curcas]
18 Hb_027346_020 0.2799426244 - - -
19 Hb_005914_070 0.2829933291 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005000_160 0.2838984298 - - PREDICTED: uncharacterized protein LOC105637882 [Jatropha curcas]

Gene co-expression network

sample Hb_002028_060 Hb_002028_060 Hb_002478_020 Hb_002478_020 Hb_002028_060--Hb_002478_020 Hb_003052_040 Hb_003052_040 Hb_002028_060--Hb_003052_040 Hb_113635_010 Hb_113635_010 Hb_002028_060--Hb_113635_010 Hb_003893_080 Hb_003893_080 Hb_002028_060--Hb_003893_080 Hb_039946_010 Hb_039946_010 Hb_002028_060--Hb_039946_010 Hb_002290_050 Hb_002290_050 Hb_002028_060--Hb_002290_050 Hb_004942_020 Hb_004942_020 Hb_002478_020--Hb_004942_020 Hb_058143_010 Hb_058143_010 Hb_002478_020--Hb_058143_010 Hb_002478_020--Hb_039946_010 Hb_001143_070 Hb_001143_070 Hb_002478_020--Hb_001143_070 Hb_000920_320 Hb_000920_320 Hb_002478_020--Hb_000920_320 Hb_012586_020 Hb_012586_020 Hb_002478_020--Hb_012586_020 Hb_011671_400 Hb_011671_400 Hb_003052_040--Hb_011671_400 Hb_002260_090 Hb_002260_090 Hb_003052_040--Hb_002260_090 Hb_001396_190 Hb_001396_190 Hb_003052_040--Hb_001396_190 Hb_005914_070 Hb_005914_070 Hb_003052_040--Hb_005914_070 Hb_078633_010 Hb_078633_010 Hb_003052_040--Hb_078633_010 Hb_014497_110 Hb_014497_110 Hb_003052_040--Hb_014497_110 Hb_023051_020 Hb_023051_020 Hb_113635_010--Hb_023051_020 Hb_113635_010--Hb_002290_050 Hb_001186_070 Hb_001186_070 Hb_113635_010--Hb_001186_070 Hb_001373_100 Hb_001373_100 Hb_113635_010--Hb_001373_100 Hb_000329_660 Hb_000329_660 Hb_113635_010--Hb_000329_660 Hb_002326_170 Hb_002326_170 Hb_113635_010--Hb_002326_170 Hb_006502_040 Hb_006502_040 Hb_003893_080--Hb_006502_040 Hb_002431_060 Hb_002431_060 Hb_003893_080--Hb_002431_060 Hb_000714_010 Hb_000714_010 Hb_003893_080--Hb_000714_010 Hb_000861_050 Hb_000861_050 Hb_003893_080--Hb_000861_050 Hb_000599_050 Hb_000599_050 Hb_003893_080--Hb_000599_050 Hb_003592_070 Hb_003592_070 Hb_003893_080--Hb_003592_070 Hb_010589_050 Hb_010589_050 Hb_039946_010--Hb_010589_050 Hb_039946_010--Hb_012586_020 Hb_039946_010--Hb_058143_010 Hb_039946_010--Hb_004942_020 Hb_000352_180 Hb_000352_180 Hb_039946_010--Hb_000352_180 Hb_002290_050--Hb_012586_020 Hb_002290_050--Hb_001143_070 Hb_002290_050--Hb_001186_070 Hb_002290_050--Hb_039946_010 Hb_002290_050--Hb_004942_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0300957 0.0124711 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.03431 0.080974 0.0505452 0 0

CAGE analysis