Hb_001699_120

Information

Type -
Description -
Location Contig1699: 97475-98653
Sequence    

Annotation

kegg
ID rcu:RCOM_0431130
description Protein P21, putative
nr
ID XP_002533803.1
description Protein P21, putative [Ricinus communis]
swissprot
ID P83332
description Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1
trembl
ID B9T6D4
description Protein P21, putative OS=Ricinus communis GN=RCOM_0431130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001699_120 0.0 - - Protein P21, putative [Ricinus communis]
2 Hb_002973_070 0.1830364195 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
3 Hb_008725_030 0.1868602727 - - conserved hypothetical protein [Ricinus communis]
4 Hb_096974_010 0.195096947 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
5 Hb_003968_010 0.1972462098 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_003050_170 0.2011478341 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004297_050 0.202119457 - - cytochrome P450, putative [Ricinus communis]
8 Hb_023386_060 0.2130868178 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
9 Hb_004544_010 0.2138617811 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
10 Hb_003878_020 0.215870982 - - Epidermis-specific secreted glycoprotein EP1 precursor, putative [Ricinus communis]
11 Hb_001971_030 0.2206187013 - - PREDICTED: exonuclease 1 [Jatropha curcas]
12 Hb_043522_010 0.2208672792 - - -
13 Hb_000465_350 0.2229192589 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
14 Hb_004785_160 0.2252329338 - - PREDICTED: U-box domain-containing protein 28-like [Jatropha curcas]
15 Hb_002048_100 0.226620866 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Jatropha curcas]
16 Hb_000031_300 0.2313355776 - - PREDICTED: histidine kinase 5 [Jatropha curcas]
17 Hb_008948_070 0.2320569791 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
18 Hb_005599_010 0.2340944072 - - Protein MLO, putative [Ricinus communis]
19 Hb_000635_190 0.2347307754 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103322127 [Prunus mume]
20 Hb_006721_060 0.2348816349 - - RnaseH (mitochondrion) [Malus domestica]

Gene co-expression network

sample Hb_001699_120 Hb_001699_120 Hb_002973_070 Hb_002973_070 Hb_001699_120--Hb_002973_070 Hb_008725_030 Hb_008725_030 Hb_001699_120--Hb_008725_030 Hb_096974_010 Hb_096974_010 Hb_001699_120--Hb_096974_010 Hb_003968_010 Hb_003968_010 Hb_001699_120--Hb_003968_010 Hb_003050_170 Hb_003050_170 Hb_001699_120--Hb_003050_170 Hb_004297_050 Hb_004297_050 Hb_001699_120--Hb_004297_050 Hb_004785_160 Hb_004785_160 Hb_002973_070--Hb_004785_160 Hb_002774_180 Hb_002774_180 Hb_002973_070--Hb_002774_180 Hb_001141_210 Hb_001141_210 Hb_002973_070--Hb_001141_210 Hb_001971_030 Hb_001971_030 Hb_002973_070--Hb_001971_030 Hb_000031_160 Hb_000031_160 Hb_002973_070--Hb_000031_160 Hb_004544_010 Hb_004544_010 Hb_002973_070--Hb_004544_010 Hb_008725_030--Hb_003968_010 Hb_008725_030--Hb_096974_010 Hb_008725_030--Hb_004544_010 Hb_043522_010 Hb_043522_010 Hb_008725_030--Hb_043522_010 Hb_008725_030--Hb_003050_170 Hb_008725_030--Hb_004297_050 Hb_096974_010--Hb_004297_050 Hb_096974_010--Hb_003968_010 Hb_008948_070 Hb_008948_070 Hb_096974_010--Hb_008948_070 Hb_100395_010 Hb_100395_010 Hb_096974_010--Hb_100395_010 Hb_096974_010--Hb_001971_030 Hb_004096_140 Hb_004096_140 Hb_003968_010--Hb_004096_140 Hb_138705_010 Hb_138705_010 Hb_003968_010--Hb_138705_010 Hb_003968_010--Hb_003050_170 Hb_001019_140 Hb_001019_140 Hb_003968_010--Hb_001019_140 Hb_000635_190 Hb_000635_190 Hb_003050_170--Hb_000635_190 Hb_185830_090 Hb_185830_090 Hb_003050_170--Hb_185830_090 Hb_096878_010 Hb_096878_010 Hb_003050_170--Hb_096878_010 Hb_006721_060 Hb_006721_060 Hb_003050_170--Hb_006721_060 Hb_004297_050--Hb_100395_010 Hb_004297_050--Hb_003968_010 Hb_004297_050--Hb_008948_070 Hb_005599_010 Hb_005599_010 Hb_004297_050--Hb_005599_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.317926 0.451814 0.32245 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0834978 0.0921884 0

CAGE analysis