Hb_001198_140

Information

Type -
Description -
Location Contig1198: 99532-101444
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001198_140 0.0 - - -
2 Hb_000928_290 0.0515570578 - - PREDICTED: uncharacterized protein LOC104602212 [Nelumbo nucifera]
3 Hb_001971_070 0.1758423858 - - unnamed protein product [Coffea canephora]
4 Hb_010571_010 0.1912299408 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
5 Hb_027634_010 0.19527746 - - protein binding protein, putative [Ricinus communis]
6 Hb_164162_020 0.2051972516 - - PREDICTED: uncharacterized protein LOC105646964 [Jatropha curcas]
7 Hb_001195_440 0.2054165042 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
8 Hb_001522_050 0.2057760546 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Jatropha curcas]
9 Hb_006538_070 0.2060447003 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
10 Hb_001901_010 0.207731408 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
11 Hb_022181_010 0.2136005022 - - PREDICTED: peroxidase 19 [Jatropha curcas]
12 Hb_006153_200 0.2137215501 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao]
13 Hb_000005_270 0.2137343565 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
14 Hb_007181_080 0.2166141351 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
15 Hb_000077_450 0.2185558064 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_006120_010 0.220865702 - - invertase inhibitor [Manihot esculenta]
17 Hb_000521_340 0.2219162343 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
18 Hb_002499_020 0.2233204291 - - hevamine-A precursor, putative [Ricinus communis]
19 Hb_045992_010 0.2234252276 - - -
20 Hb_000115_180 0.2239695014 - - hypothetical protein RCOM_1308310 [Ricinus communis]

Gene co-expression network

sample Hb_001198_140 Hb_001198_140 Hb_000928_290 Hb_000928_290 Hb_001198_140--Hb_000928_290 Hb_001971_070 Hb_001971_070 Hb_001198_140--Hb_001971_070 Hb_010571_010 Hb_010571_010 Hb_001198_140--Hb_010571_010 Hb_027634_010 Hb_027634_010 Hb_001198_140--Hb_027634_010 Hb_164162_020 Hb_164162_020 Hb_001198_140--Hb_164162_020 Hb_001195_440 Hb_001195_440 Hb_001198_140--Hb_001195_440 Hb_000928_290--Hb_010571_010 Hb_000928_290--Hb_001971_070 Hb_001522_050 Hb_001522_050 Hb_000928_290--Hb_001522_050 Hb_000928_290--Hb_027634_010 Hb_006120_010 Hb_006120_010 Hb_000928_290--Hb_006120_010 Hb_001901_010 Hb_001901_010 Hb_001971_070--Hb_001901_010 Hb_001971_070--Hb_164162_020 Hb_004544_080 Hb_004544_080 Hb_001971_070--Hb_004544_080 Hb_003462_150 Hb_003462_150 Hb_001971_070--Hb_003462_150 Hb_006538_070 Hb_006538_070 Hb_001971_070--Hb_006538_070 Hb_002999_090 Hb_002999_090 Hb_001971_070--Hb_002999_090 Hb_002499_020 Hb_002499_020 Hb_010571_010--Hb_002499_020 Hb_046191_010 Hb_046191_010 Hb_010571_010--Hb_046191_010 Hb_003469_030 Hb_003469_030 Hb_010571_010--Hb_003469_030 Hb_010571_010--Hb_006120_010 Hb_007181_080 Hb_007181_080 Hb_010571_010--Hb_007181_080 Hb_005056_030 Hb_005056_030 Hb_010571_010--Hb_005056_030 Hb_000175_480 Hb_000175_480 Hb_027634_010--Hb_000175_480 Hb_002042_200 Hb_002042_200 Hb_027634_010--Hb_002042_200 Hb_001623_400 Hb_001623_400 Hb_027634_010--Hb_001623_400 Hb_018133_110 Hb_018133_110 Hb_027634_010--Hb_018133_110 Hb_001959_030 Hb_001959_030 Hb_027634_010--Hb_001959_030 Hb_004122_030 Hb_004122_030 Hb_027634_010--Hb_004122_030 Hb_164162_020--Hb_006538_070 Hb_164162_020--Hb_001901_010 Hb_000948_070 Hb_000948_070 Hb_164162_020--Hb_000948_070 Hb_166813_010 Hb_166813_010 Hb_164162_020--Hb_166813_010 Hb_006538_050 Hb_006538_050 Hb_164162_020--Hb_006538_050 Hb_006153_200 Hb_006153_200 Hb_001195_440--Hb_006153_200 Hb_001195_440--Hb_001901_010 Hb_001195_440--Hb_164162_020 Hb_001195_440--Hb_001971_070 Hb_001195_440--Hb_004544_080 Hb_001195_440--Hb_006538_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0247051 0.0206343 0 0.099799 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.323383 0

CAGE analysis