Hb_001114_080

Information

Type -
Description -
Location Contig1114: 89677-92010
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa019021mg
description hypothetical protein
nr
ID XP_007200108.1
description hypothetical protein PRUPE_ppa019021mg, partial [Prunus persica]
swissprot
ID P0CB23
description Uncharacterized protein At4g38062 OS=Arabidopsis thaliana GN=At4g38062 PE=4 SV=1
trembl
ID M5VJN5
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019021mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03479: 90925-91324
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001114_080 0.0 - - hypothetical protein PRUPE_ppa019021mg, partial [Prunus persica]
2 Hb_000796_010 0.1184993697 - - PREDICTED: nitrogen regulatory protein P-II homolog [Jatropha curcas]
3 Hb_024074_010 0.1257003872 - - PREDICTED: cytochrome c [Jatropha curcas]
4 Hb_000742_280 0.1300858905 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000331_430 0.1310039185 - - PREDICTED: uncharacterized protein LOC105640242 [Jatropha curcas]
6 Hb_007894_050 0.1310195075 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
7 Hb_066720_010 0.1337046883 - - PREDICTED: histone H2B [Jatropha curcas]
8 Hb_000302_140 0.1430432851 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Jatropha curcas]
9 Hb_003126_130 0.1480995675 - - inositol-1-monophosphatase family protein [Populus trichocarpa]
10 Hb_010560_030 0.1494408322 - - PREDICTED: mitochondrial pyruvate carrier 4-like [Jatropha curcas]
11 Hb_002228_070 0.1513535507 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
12 Hb_001073_080 0.1523531512 - - PREDICTED: protein root UVB sensitive 2, chloroplastic [Jatropha curcas]
13 Hb_002374_080 0.1525561036 - - PREDICTED: chloroplast processing peptidase-like isoform X1 [Jatropha curcas]
14 Hb_189216_030 0.1531583326 - - Pleiotropic drug resistance protein, putative [Ricinus communis]
15 Hb_006153_040 0.1534039245 - - hypothetical protein PRUPE_ppa014788mg [Prunus persica]
16 Hb_001234_070 0.1537509768 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Populus euphratica]
17 Hb_000429_040 0.154800708 - - PREDICTED: chaperone protein dnaJ 6 [Vitis vinifera]
18 Hb_000340_500 0.1549628919 - - PREDICTED: aldo-keto reductase-like [Jatropha curcas]
19 Hb_000676_390 0.1552304582 - - PREDICTED: protein FMP32, mitochondrial [Jatropha curcas]
20 Hb_001377_450 0.156044052 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001114_080 Hb_001114_080 Hb_000796_010 Hb_000796_010 Hb_001114_080--Hb_000796_010 Hb_024074_010 Hb_024074_010 Hb_001114_080--Hb_024074_010 Hb_000742_280 Hb_000742_280 Hb_001114_080--Hb_000742_280 Hb_000331_430 Hb_000331_430 Hb_001114_080--Hb_000331_430 Hb_007894_050 Hb_007894_050 Hb_001114_080--Hb_007894_050 Hb_066720_010 Hb_066720_010 Hb_001114_080--Hb_066720_010 Hb_001019_100 Hb_001019_100 Hb_000796_010--Hb_001019_100 Hb_003126_130 Hb_003126_130 Hb_000796_010--Hb_003126_130 Hb_007425_010 Hb_007425_010 Hb_000796_010--Hb_007425_010 Hb_000796_010--Hb_066720_010 Hb_001059_160 Hb_001059_160 Hb_000796_010--Hb_001059_160 Hb_000302_140 Hb_000302_140 Hb_024074_010--Hb_000302_140 Hb_002260_010 Hb_002260_010 Hb_024074_010--Hb_002260_010 Hb_000731_190 Hb_000731_190 Hb_024074_010--Hb_000731_190 Hb_001053_140 Hb_001053_140 Hb_024074_010--Hb_001053_140 Hb_004057_010 Hb_004057_010 Hb_024074_010--Hb_004057_010 Hb_131181_010 Hb_131181_010 Hb_024074_010--Hb_131181_010 Hb_000742_280--Hb_024074_010 Hb_000742_280--Hb_131181_010 Hb_000317_070 Hb_000317_070 Hb_000742_280--Hb_000317_070 Hb_010560_030 Hb_010560_030 Hb_000742_280--Hb_010560_030 Hb_000069_700 Hb_000069_700 Hb_000742_280--Hb_000069_700 Hb_001449_010 Hb_001449_010 Hb_000331_430--Hb_001449_010 Hb_002811_290 Hb_002811_290 Hb_000331_430--Hb_002811_290 Hb_001234_070 Hb_001234_070 Hb_000331_430--Hb_001234_070 Hb_002228_070 Hb_002228_070 Hb_000331_430--Hb_002228_070 Hb_004041_020 Hb_004041_020 Hb_000331_430--Hb_004041_020 Hb_000429_040 Hb_000429_040 Hb_000331_430--Hb_000429_040 Hb_001073_080 Hb_001073_080 Hb_007894_050--Hb_001073_080 Hb_001301_340 Hb_001301_340 Hb_007894_050--Hb_001301_340 Hb_007894_050--Hb_003126_130 Hb_002872_050 Hb_002872_050 Hb_007894_050--Hb_002872_050 Hb_000392_550 Hb_000392_550 Hb_007894_050--Hb_000392_550 Hb_001377_450 Hb_001377_450 Hb_007894_050--Hb_001377_450 Hb_066720_010--Hb_000302_140 Hb_066720_010--Hb_002228_070 Hb_006538_090 Hb_006538_090 Hb_066720_010--Hb_006538_090 Hb_000174_210 Hb_000174_210 Hb_066720_010--Hb_000174_210 Hb_004994_210 Hb_004994_210 Hb_066720_010--Hb_004994_210 Hb_000402_160 Hb_000402_160 Hb_066720_010--Hb_000402_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.200523 0.0858026 0.558082 0.289767 0.0403417 0.0531399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.514105 0.554362 0.427805 0.261923 0.190776

CAGE analysis