Hb_001091_060

Information

Type -
Description -
Location Contig1091: 54740-62415
Sequence    

Annotation

kegg
ID mdm:103400082
description uncharacterized LOC103400082
nr
ID KDP43113.1
description hypothetical protein JCGZ_27062 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L798
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27062 PE=4 SV=1
Gene Ontology
ID GO:0032550
description disease resistance rga3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02783: 54944-55848 , PASA_asmbl_02785: 54749-56195 , PASA_asmbl_02786: 55419-56195 , PASA_asmbl_02787: 54749-55160 , PASA_asmbl_02788: 62033-62468
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001091_060 0.0 - - hypothetical protein JCGZ_27062 [Jatropha curcas]
2 Hb_002970_030 0.0738330086 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012092_040 0.1176441244 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
4 Hb_001205_290 0.1247415641 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
5 Hb_004112_080 0.1264016208 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
6 Hb_003055_160 0.1295554737 - - PREDICTED: S-linalool synthase isoform X1 [Jatropha curcas]
7 Hb_011628_010 0.1299091781 - - tonoplast intrinsic protein, putative [Ricinus communis]
8 Hb_002307_150 0.1341075255 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
9 Hb_165110_010 0.1342382797 - - PREDICTED: kunitz-type elastase inhibitor BrEI-like [Jatropha curcas]
10 Hb_000089_090 0.1391263501 - - hypothetical protein POPTR_0019s12670g [Populus trichocarpa]
11 Hb_005211_170 0.1417216641 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
12 Hb_002641_090 0.143530817 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
13 Hb_009367_070 0.1442000209 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
14 Hb_089140_070 0.1446305841 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
15 Hb_001052_020 0.1460623618 - - hypothetical protein JCGZ_26487 [Jatropha curcas]
16 Hb_000333_140 0.1468541772 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
17 Hb_030360_010 0.1473611633 - - -
18 Hb_089040_010 0.1487727656 - - Glycosyl hydrolase family protein isoform 1 [Theobroma cacao]
19 Hb_000270_050 0.1490349767 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
20 Hb_001247_060 0.149253972 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001091_060 Hb_001091_060 Hb_002970_030 Hb_002970_030 Hb_001091_060--Hb_002970_030 Hb_012092_040 Hb_012092_040 Hb_001091_060--Hb_012092_040 Hb_001205_290 Hb_001205_290 Hb_001091_060--Hb_001205_290 Hb_004112_080 Hb_004112_080 Hb_001091_060--Hb_004112_080 Hb_003055_160 Hb_003055_160 Hb_001091_060--Hb_003055_160 Hb_011628_010 Hb_011628_010 Hb_001091_060--Hb_011628_010 Hb_002970_030--Hb_012092_040 Hb_089040_010 Hb_089040_010 Hb_002970_030--Hb_089040_010 Hb_002307_150 Hb_002307_150 Hb_002970_030--Hb_002307_150 Hb_002970_030--Hb_001205_290 Hb_002970_030--Hb_004112_080 Hb_000089_090 Hb_000089_090 Hb_012092_040--Hb_000089_090 Hb_001247_060 Hb_001247_060 Hb_012092_040--Hb_001247_060 Hb_089140_070 Hb_089140_070 Hb_012092_040--Hb_089140_070 Hb_000035_230 Hb_000035_230 Hb_012092_040--Hb_000035_230 Hb_003464_010 Hb_003464_010 Hb_012092_040--Hb_003464_010 Hb_000390_010 Hb_000390_010 Hb_012092_040--Hb_000390_010 Hb_001205_290--Hb_001247_060 Hb_001205_290--Hb_012092_040 Hb_000270_050 Hb_000270_050 Hb_001205_290--Hb_000270_050 Hb_001205_290--Hb_000089_090 Hb_001205_290--Hb_089140_070 Hb_030360_010 Hb_030360_010 Hb_004112_080--Hb_030360_010 Hb_009367_070 Hb_009367_070 Hb_004112_080--Hb_009367_070 Hb_039075_010 Hb_039075_010 Hb_004112_080--Hb_039075_010 Hb_004705_060 Hb_004705_060 Hb_004112_080--Hb_004705_060 Hb_004112_080--Hb_011628_010 Hb_034713_010 Hb_034713_010 Hb_004112_080--Hb_034713_010 Hb_123713_010 Hb_123713_010 Hb_003055_160--Hb_123713_010 Hb_004724_280 Hb_004724_280 Hb_003055_160--Hb_004724_280 Hb_001856_210 Hb_001856_210 Hb_003055_160--Hb_001856_210 Hb_003055_160--Hb_000089_090 Hb_105377_010 Hb_105377_010 Hb_003055_160--Hb_105377_010 Hb_001123_330 Hb_001123_330 Hb_003055_160--Hb_001123_330 Hb_000333_140 Hb_000333_140 Hb_011628_010--Hb_000333_140 Hb_001136_080 Hb_001136_080 Hb_011628_010--Hb_001136_080 Hb_011628_010--Hb_002307_150 Hb_005211_170 Hb_005211_170 Hb_011628_010--Hb_005211_170 Hb_011628_010--Hb_009367_070 Hb_011628_010--Hb_039075_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.942685 10.0962 22.7675 0.0265998 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.27893 1.26502 0.4128

CAGE analysis