Hb_000948_130

Information

Type -
Description -
Location Contig948: 143134-143613
Sequence    

Annotation

kegg
ID rcu:RCOM_0517290
description hypothetical protein
nr
ID XP_002528756.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SRY7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0517290 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000948_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001452_060 0.1996551306 - - -
3 Hb_020817_030 0.2028598537 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
4 Hb_037684_010 0.2099683999 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
5 Hb_002053_170 0.2192984032 - - cytochrome P450, putative [Ricinus communis]
6 Hb_000899_060 0.2242433975 - - PREDICTED: uncharacterized protein LOC105793631 [Gossypium raimondii]
7 Hb_000115_290 0.231504479 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
8 Hb_145603_010 0.2370139622 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
9 Hb_004462_030 0.2385246999 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
10 Hb_000994_100 0.2388526248 - - RALFL33, putative [Ricinus communis]
11 Hb_055529_010 0.2407578598 transcription factor TF Family: ERF Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
12 Hb_001277_380 0.241352558 - - PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Tarenaya hassleriana]
13 Hb_004307_070 0.2423358192 - - kinase, putative [Ricinus communis]
14 Hb_002374_520 0.2439717729 - - early nodulin 8 precursor family protein [Populus trichocarpa]
15 Hb_000036_060 0.2462448722 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
16 Hb_016564_050 0.2464732374 - - -
17 Hb_116194_010 0.2474344314 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_006355_070 0.2476675494 transcription factor TF Family: bHLH Phytochrome-interacting factor, putative [Ricinus communis]
19 Hb_000245_100 0.2477890415 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
20 Hb_002814_050 0.2482293516 - - PREDICTED: sugar carrier protein A [Jatropha curcas]

Gene co-expression network

sample Hb_000948_130 Hb_000948_130 Hb_001452_060 Hb_001452_060 Hb_000948_130--Hb_001452_060 Hb_020817_030 Hb_020817_030 Hb_000948_130--Hb_020817_030 Hb_037684_010 Hb_037684_010 Hb_000948_130--Hb_037684_010 Hb_002053_170 Hb_002053_170 Hb_000948_130--Hb_002053_170 Hb_000899_060 Hb_000899_060 Hb_000948_130--Hb_000899_060 Hb_000115_290 Hb_000115_290 Hb_000948_130--Hb_000115_290 Hb_004657_080 Hb_004657_080 Hb_001452_060--Hb_004657_080 Hb_065500_010 Hb_065500_010 Hb_001452_060--Hb_065500_010 Hb_048643_010 Hb_048643_010 Hb_001452_060--Hb_048643_010 Hb_005288_210 Hb_005288_210 Hb_001452_060--Hb_005288_210 Hb_000205_230 Hb_000205_230 Hb_001452_060--Hb_000205_230 Hb_020817_030--Hb_037684_010 Hb_020817_030--Hb_000899_060 Hb_020817_030--Hb_002053_170 Hb_007802_010 Hb_007802_010 Hb_020817_030--Hb_007802_010 Hb_001907_050 Hb_001907_050 Hb_020817_030--Hb_001907_050 Hb_011470_010 Hb_011470_010 Hb_020817_030--Hb_011470_010 Hb_037684_010--Hb_000899_060 Hb_002374_520 Hb_002374_520 Hb_037684_010--Hb_002374_520 Hb_000245_100 Hb_000245_100 Hb_037684_010--Hb_000245_100 Hb_037684_010--Hb_002053_170 Hb_002598_020 Hb_002598_020 Hb_037684_010--Hb_002598_020 Hb_002213_050 Hb_002213_050 Hb_002053_170--Hb_002213_050 Hb_002808_010 Hb_002808_010 Hb_002053_170--Hb_002808_010 Hb_001131_050 Hb_001131_050 Hb_002053_170--Hb_001131_050 Hb_016564_050 Hb_016564_050 Hb_002053_170--Hb_016564_050 Hb_002477_080 Hb_002477_080 Hb_000899_060--Hb_002477_080 Hb_000899_060--Hb_002374_520 Hb_000899_060--Hb_002598_020 Hb_000090_020 Hb_000090_020 Hb_000899_060--Hb_000090_020 Hb_103541_010 Hb_103541_010 Hb_000899_060--Hb_103541_010 Hb_032260_130 Hb_032260_130 Hb_000115_290--Hb_032260_130 Hb_010417_090 Hb_010417_090 Hb_000115_290--Hb_010417_090 Hb_116194_010 Hb_116194_010 Hb_000115_290--Hb_116194_010 Hb_000994_100 Hb_000994_100 Hb_000115_290--Hb_000994_100 Hb_002970_070 Hb_002970_070 Hb_000115_290--Hb_002970_070 Hb_000115_290--Hb_002374_520
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.423939 0 0.659701 0.115228 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.376791 0.417928

CAGE analysis