Hb_000922_180

Information

Type -
Description -
Location Contig922: 185443-187956
Sequence    

Annotation

kegg
ID rcu:RCOM_1510560
description hypothetical protein
nr
ID XP_012080065.1
description PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 [Jatropha curcas]
swissprot
ID Q9FJJ3
description Probable inactive poly [ADP-ribose] polymerase SRO5 OS=Arabidopsis thaliana GN=SRO5 PE=1 SV=1
trembl
ID A0A067K7U4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11474 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_180 0.0 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 [Jatropha curcas]
2 Hb_001141_400 0.211882406 - - hypothetical protein B456_007G2854002, partial [Gossypium raimondii]
3 Hb_007904_090 0.2153954873 - - PREDICTED: uncharacterized protein LOC100261196 [Vitis vinifera]
4 Hb_000373_300 0.2212175435 - - hypothetical protein F775_20382 [Aegilops tauschii]
5 Hb_002233_110 0.2218574651 - - PREDICTED: nuclear transcription factor Y subunit B-3-like [Jatropha curcas]
6 Hb_000861_050 0.2279496612 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
7 Hb_000175_040 0.2294190125 - - hypothetical protein JCGZ_06119 [Jatropha curcas]
8 Hb_001143_010 0.2330302982 - - -
9 Hb_010128_110 0.2405399566 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
10 Hb_019033_010 0.2453548138 - - PREDICTED: uncharacterized protein LOC105643397 [Jatropha curcas]
11 Hb_002685_180 0.2464481236 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
12 Hb_001437_050 0.2526658147 - - PREDICTED: ABC transporter G family member 28 [Jatropha curcas]
13 Hb_000567_280 0.2566643175 - - PREDICTED: uncharacterized protein At4g06598-like [Populus euphratica]
14 Hb_001186_050 0.2570811095 - - -
15 Hb_006502_040 0.2588966311 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
16 Hb_003992_120 0.2614476275 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
17 Hb_002835_220 0.2632963496 - - PREDICTED: MATE efflux family protein 7 [Vitis vinifera]
18 Hb_004502_080 0.2642840095 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
19 Hb_000275_010 0.2682923585 - - -
20 Hb_002741_030 0.2703175863 - - -

Gene co-expression network

sample Hb_000922_180 Hb_000922_180 Hb_001141_400 Hb_001141_400 Hb_000922_180--Hb_001141_400 Hb_007904_090 Hb_007904_090 Hb_000922_180--Hb_007904_090 Hb_000373_300 Hb_000373_300 Hb_000922_180--Hb_000373_300 Hb_002233_110 Hb_002233_110 Hb_000922_180--Hb_002233_110 Hb_000861_050 Hb_000861_050 Hb_000922_180--Hb_000861_050 Hb_000175_040 Hb_000175_040 Hb_000922_180--Hb_000175_040 Hb_001141_400--Hb_000373_300 Hb_002742_010 Hb_002742_010 Hb_001141_400--Hb_002742_010 Hb_028365_010 Hb_028365_010 Hb_001141_400--Hb_028365_010 Hb_010128_110 Hb_010128_110 Hb_001141_400--Hb_010128_110 Hb_188382_010 Hb_188382_010 Hb_001141_400--Hb_188382_010 Hb_159085_010 Hb_159085_010 Hb_001141_400--Hb_159085_010 Hb_000376_160 Hb_000376_160 Hb_007904_090--Hb_000376_160 Hb_011431_010 Hb_011431_010 Hb_007904_090--Hb_011431_010 Hb_068804_150 Hb_068804_150 Hb_007904_090--Hb_068804_150 Hb_002685_180 Hb_002685_180 Hb_007904_090--Hb_002685_180 Hb_007904_090--Hb_000175_040 Hb_008078_030 Hb_008078_030 Hb_007904_090--Hb_008078_030 Hb_000373_300--Hb_002742_010 Hb_002741_030 Hb_002741_030 Hb_000373_300--Hb_002741_030 Hb_000373_300--Hb_000861_050 Hb_001143_010 Hb_001143_010 Hb_000373_300--Hb_001143_010 Hb_000373_300--Hb_159085_010 Hb_001437_050 Hb_001437_050 Hb_002233_110--Hb_001437_050 Hb_019033_010 Hb_019033_010 Hb_002233_110--Hb_019033_010 Hb_000091_100 Hb_000091_100 Hb_002233_110--Hb_000091_100 Hb_004502_080 Hb_004502_080 Hb_002233_110--Hb_004502_080 Hb_000736_010 Hb_000736_010 Hb_002233_110--Hb_000736_010 Hb_002835_220 Hb_002835_220 Hb_002233_110--Hb_002835_220 Hb_005410_030 Hb_005410_030 Hb_000861_050--Hb_005410_030 Hb_000052_010 Hb_000052_010 Hb_000861_050--Hb_000052_010 Hb_003023_050 Hb_003023_050 Hb_000861_050--Hb_003023_050 Hb_004055_060 Hb_004055_060 Hb_000861_050--Hb_004055_060 Hb_000714_010 Hb_000714_010 Hb_000861_050--Hb_000714_010 Hb_000005_030 Hb_000005_030 Hb_000861_050--Hb_000005_030 Hb_003057_130 Hb_003057_130 Hb_000175_040--Hb_003057_130 Hb_025246_010 Hb_025246_010 Hb_000175_040--Hb_025246_010 Hb_000699_110 Hb_000699_110 Hb_000175_040--Hb_000699_110 Hb_000788_120 Hb_000788_120 Hb_000175_040--Hb_000788_120 Hb_007625_020 Hb_007625_020 Hb_000175_040--Hb_007625_020 Hb_000175_040--Hb_004502_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.15979 0 0.0920091 0.0650654 0.215164 0.370148
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.55307 1.69935 0 0.012371 0.256156

CAGE analysis