Hb_000723_300

Information

Type -
Description -
Location Contig723: 312043-312670
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000723_300 0.0 - - -
2 Hb_009181_020 0.3051606906 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_001115_110 0.3074324346 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
4 Hb_002473_040 0.3578478712 - - PREDICTED: rRNA methyltransferase 3B, mitochondrial [Jatropha curcas]
5 Hb_000345_120 0.38023579 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
6 Hb_019219_020 0.3839963566 - - profilin-1 [Jatropha curcas]
7 Hb_000424_160 0.3902432838 - - hypothetical protein POPTR_0006s23570g [Populus trichocarpa]
8 Hb_000861_090 0.3906675983 - - -
9 Hb_027751_050 0.3921872168 - - hypothetical protein JCGZ_05887 [Jatropha curcas]
10 Hb_002272_040 0.3944524779 - - hypothetical protein POPTR_0013s02610g, partial [Populus trichocarpa]
11 Hb_008507_050 0.3990944379 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Jatropha curcas]
12 Hb_000529_230 0.400294283 - - PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Prunus mume]
13 Hb_000107_130 0.4044389507 - - multicopper oxidase, putative [Ricinus communis]
14 Hb_001882_060 0.4063319977 - - -
15 Hb_168978_040 0.4086201346 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
16 Hb_001773_020 0.4105188316 - - hypothetical protein POPTR_0016s00980g [Populus trichocarpa]
17 Hb_085375_010 0.411861317 - - protein with unknown function [Ricinus communis]
18 Hb_029508_010 0.4154305381 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
19 Hb_000008_230 0.4164839027 - - hypothetical protein POPTR_0004s22120g [Populus trichocarpa]
20 Hb_097433_010 0.4208865949 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]

Gene co-expression network

sample Hb_000723_300 Hb_000723_300 Hb_009181_020 Hb_009181_020 Hb_000723_300--Hb_009181_020 Hb_001115_110 Hb_001115_110 Hb_000723_300--Hb_001115_110 Hb_002473_040 Hb_002473_040 Hb_000723_300--Hb_002473_040 Hb_000345_120 Hb_000345_120 Hb_000723_300--Hb_000345_120 Hb_019219_020 Hb_019219_020 Hb_000723_300--Hb_019219_020 Hb_000424_160 Hb_000424_160 Hb_000723_300--Hb_000424_160 Hb_000861_090 Hb_000861_090 Hb_009181_020--Hb_000861_090 Hb_009181_020--Hb_001115_110 Hb_027751_050 Hb_027751_050 Hb_009181_020--Hb_027751_050 Hb_031089_060 Hb_031089_060 Hb_009181_020--Hb_031089_060 Hb_000866_160 Hb_000866_160 Hb_009181_020--Hb_000866_160 Hb_000987_090 Hb_000987_090 Hb_001115_110--Hb_000987_090 Hb_001787_040 Hb_001787_040 Hb_001115_110--Hb_001787_040 Hb_116195_010 Hb_116195_010 Hb_001115_110--Hb_116195_010 Hb_142392_010 Hb_142392_010 Hb_001115_110--Hb_142392_010 Hb_004635_130 Hb_004635_130 Hb_002473_040--Hb_004635_130 Hb_010068_060 Hb_010068_060 Hb_002473_040--Hb_010068_060 Hb_097433_010 Hb_097433_010 Hb_002473_040--Hb_097433_010 Hb_000008_230 Hb_000008_230 Hb_002473_040--Hb_000008_230 Hb_085375_010 Hb_085375_010 Hb_002473_040--Hb_085375_010 Hb_030928_040 Hb_030928_040 Hb_002473_040--Hb_030928_040 Hb_002890_190 Hb_002890_190 Hb_000345_120--Hb_002890_190 Hb_000345_120--Hb_000424_160 Hb_003462_010 Hb_003462_010 Hb_000345_120--Hb_003462_010 Hb_005730_080 Hb_005730_080 Hb_000345_120--Hb_005730_080 Hb_000345_120--Hb_027751_050 Hb_153558_010 Hb_153558_010 Hb_000345_120--Hb_153558_010 Hb_030565_080 Hb_030565_080 Hb_019219_020--Hb_030565_080 Hb_027760_010 Hb_027760_010 Hb_019219_020--Hb_027760_010 Hb_002338_060 Hb_002338_060 Hb_019219_020--Hb_002338_060 Hb_004374_060 Hb_004374_060 Hb_019219_020--Hb_004374_060 Hb_019516_020 Hb_019516_020 Hb_019219_020--Hb_019516_020 Hb_000173_100 Hb_000173_100 Hb_019219_020--Hb_000173_100 Hb_000318_260 Hb_000318_260 Hb_000424_160--Hb_000318_260 Hb_000424_160--Hb_085375_010 Hb_000976_180 Hb_000976_180 Hb_000424_160--Hb_000976_180 Hb_003320_030 Hb_003320_030 Hb_000424_160--Hb_003320_030 Hb_004712_110 Hb_004712_110 Hb_000424_160--Hb_004712_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0989376 0.145963 0 3.24427 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.657628 0.344403 0 0.149115 0.297472

CAGE analysis