Hb_031089_060

Information

Type -
Description -
Location Contig31089: 57961-59217
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031089_060 0.0 - - -
2 Hb_000866_160 0.0015844002 - - PREDICTED: elicitor-responsive protein 3 [Populus euphratica]
3 Hb_000487_390 0.1347593158 - - PREDICTED: putative pumilio homolog 21 [Jatropha curcas]
4 Hb_001263_020 0.1395779908 - - -
5 Hb_012656_010 0.1407761601 - - -
6 Hb_003812_010 0.1504138055 - - -
7 Hb_001754_220 0.2026794274 - - -
8 Hb_019654_160 0.2665370092 - - Zinc finger protein GIS2 [Medicago truncatula]
9 Hb_012799_090 0.2679395574 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like [Jatropha curcas]
10 Hb_001798_040 0.3074538526 transcription factor TF Family: NAC hypothetical protein ARALYDRAFT_918808 [Arabidopsis lyrata subsp. lyrata]
11 Hb_000982_030 0.3116282533 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009181_020 0.3304954504 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_007189_020 0.337415329 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
14 Hb_000326_020 0.3380822323 - - -
15 Hb_000917_250 0.3406025165 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
16 Hb_000861_090 0.3572654617 - - -
17 Hb_002383_060 0.3604214823 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
18 Hb_005524_010 0.3744524433 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
19 Hb_000330_180 0.3857590744 - - -
20 Hb_001541_240 0.3908201381 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_031089_060 Hb_031089_060 Hb_000866_160 Hb_000866_160 Hb_031089_060--Hb_000866_160 Hb_000487_390 Hb_000487_390 Hb_031089_060--Hb_000487_390 Hb_001263_020 Hb_001263_020 Hb_031089_060--Hb_001263_020 Hb_012656_010 Hb_012656_010 Hb_031089_060--Hb_012656_010 Hb_003812_010 Hb_003812_010 Hb_031089_060--Hb_003812_010 Hb_001754_220 Hb_001754_220 Hb_031089_060--Hb_001754_220 Hb_000866_160--Hb_000487_390 Hb_000866_160--Hb_001263_020 Hb_000866_160--Hb_012656_010 Hb_000866_160--Hb_003812_010 Hb_000866_160--Hb_001754_220 Hb_000487_390--Hb_001263_020 Hb_000487_390--Hb_012656_010 Hb_000487_390--Hb_003812_010 Hb_000487_390--Hb_001754_220 Hb_019654_160 Hb_019654_160 Hb_000487_390--Hb_019654_160 Hb_001263_020--Hb_012656_010 Hb_001263_020--Hb_003812_010 Hb_001263_020--Hb_001754_220 Hb_001263_020--Hb_019654_160 Hb_012799_090 Hb_012799_090 Hb_001263_020--Hb_012799_090 Hb_012656_010--Hb_003812_010 Hb_012656_010--Hb_001754_220 Hb_012656_010--Hb_019654_160 Hb_012656_010--Hb_012799_090 Hb_003812_010--Hb_001754_220 Hb_003812_010--Hb_019654_160 Hb_003812_010--Hb_012799_090 Hb_001754_220--Hb_019654_160 Hb_001754_220--Hb_012799_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0912651 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0857249 0 0 0

CAGE analysis