Hb_000703_260

Information

Type -
Description -
Location Contig703: 263930-266957
Sequence    

Annotation

kegg
ID rcu:RCOM_0536320
description N-acetylglucosamine kinase, putative
nr
ID XP_002521585.1
description N-acetylglucosamine kinase, putative [Ricinus communis]
swissprot
ID Q54PM7
description N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2
trembl
ID B9S6G6
description N-acetylglucosamine kinase, putative OS=Ricinus communis GN=RCOM_0536320 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_260 0.0 - - N-acetylglucosamine kinase, putative [Ricinus communis]
2 Hb_003687_020 0.1766858 - - PREDICTED: 60S ribosomal protein L14-1 [Jatropha curcas]
3 Hb_006502_080 0.1803048389 - - -
4 Hb_000656_100 0.202762502 - - PREDICTED: uncharacterized protein LOC105633651 [Jatropha curcas]
5 Hb_001789_130 0.2043770214 - - short-chain dehydrogenase Tic32 family protein [Populus trichocarpa]
6 Hb_002849_040 0.2044333198 - - caax prenyl protease ste24, putative [Ricinus communis]
7 Hb_150379_010 0.2074970395 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647563 [Jatropha curcas]
8 Hb_001080_220 0.2082986761 - - TPA: hypothetical protein ZEAMMB73_966926 [Zea mays]
9 Hb_000931_010 0.2111496484 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007317_060 0.2115328128 - - 60S ribosomal protein L10aB [Hevea brasiliensis]
11 Hb_000015_210 0.2152340302 - - PREDICTED: uncharacterized protein LOC105647781 [Jatropha curcas]
12 Hb_000096_060 0.2156012804 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007012_020 0.216023141 - - hypothetical protein POPTR_0005s11940g [Populus trichocarpa]
14 Hb_000648_030 0.2180162289 - - hypothetical protein PHAVU_002G055100g [Phaseolus vulgaris]
15 Hb_075136_010 0.2183678506 - - Protein SSU72, putative [Ricinus communis]
16 Hb_005400_030 0.2189847207 - - PREDICTED: LYR motif-containing protein At3g19508 [Jatropha curcas]
17 Hb_005656_050 0.2203044461 - - PREDICTED: protein FAM32A-like [Jatropha curcas]
18 Hb_001840_120 0.2204791188 - - PREDICTED: uncharacterized protein LOC104228746 [Nicotiana sylvestris]
19 Hb_032927_010 0.2207686924 - - -
20 Hb_000329_770 0.221472067 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000703_260 Hb_000703_260 Hb_003687_020 Hb_003687_020 Hb_000703_260--Hb_003687_020 Hb_006502_080 Hb_006502_080 Hb_000703_260--Hb_006502_080 Hb_000656_100 Hb_000656_100 Hb_000703_260--Hb_000656_100 Hb_001789_130 Hb_001789_130 Hb_000703_260--Hb_001789_130 Hb_002849_040 Hb_002849_040 Hb_000703_260--Hb_002849_040 Hb_150379_010 Hb_150379_010 Hb_000703_260--Hb_150379_010 Hb_000193_350 Hb_000193_350 Hb_003687_020--Hb_000193_350 Hb_025193_050 Hb_025193_050 Hb_003687_020--Hb_025193_050 Hb_007317_060 Hb_007317_060 Hb_003687_020--Hb_007317_060 Hb_005224_050 Hb_005224_050 Hb_003687_020--Hb_005224_050 Hb_002259_150 Hb_002259_150 Hb_003687_020--Hb_002259_150 Hb_000684_230 Hb_000684_230 Hb_003687_020--Hb_000684_230 Hb_032927_010 Hb_032927_010 Hb_006502_080--Hb_032927_010 Hb_000812_040 Hb_000812_040 Hb_006502_080--Hb_000812_040 Hb_007012_020 Hb_007012_020 Hb_006502_080--Hb_007012_020 Hb_136731_010 Hb_136731_010 Hb_006502_080--Hb_136731_010 Hb_067776_010 Hb_067776_010 Hb_006502_080--Hb_067776_010 Hb_000329_770 Hb_000329_770 Hb_006502_080--Hb_000329_770 Hb_000656_100--Hb_067776_010 Hb_000656_100--Hb_032927_010 Hb_000656_100--Hb_007012_020 Hb_000656_100--Hb_006502_080 Hb_000656_100--Hb_000812_040 Hb_005615_080 Hb_005615_080 Hb_000656_100--Hb_005615_080 Hb_004800_120 Hb_004800_120 Hb_001789_130--Hb_004800_120 Hb_000003_730 Hb_000003_730 Hb_001789_130--Hb_000003_730 Hb_004502_020 Hb_004502_020 Hb_001789_130--Hb_004502_020 Hb_000152_550 Hb_000152_550 Hb_001789_130--Hb_000152_550 Hb_002016_120 Hb_002016_120 Hb_001789_130--Hb_002016_120 Hb_001117_090 Hb_001117_090 Hb_001789_130--Hb_001117_090 Hb_002205_050 Hb_002205_050 Hb_002849_040--Hb_002205_050 Hb_004060_030 Hb_004060_030 Hb_002849_040--Hb_004060_030 Hb_022092_090 Hb_022092_090 Hb_002849_040--Hb_022092_090 Hb_002849_040--Hb_006502_080 Hb_005656_050 Hb_005656_050 Hb_002849_040--Hb_005656_050 Hb_000413_160 Hb_000413_160 Hb_002849_040--Hb_000413_160 Hb_000931_010 Hb_000931_010 Hb_150379_010--Hb_000931_010 Hb_001009_300 Hb_001009_300 Hb_150379_010--Hb_001009_300 Hb_184403_020 Hb_184403_020 Hb_150379_010--Hb_184403_020 Hb_020000_010 Hb_020000_010 Hb_150379_010--Hb_020000_010 Hb_150379_010--Hb_004800_120 Hb_001019_040 Hb_001019_040 Hb_150379_010--Hb_001019_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.27872 0 0.387748 0.141867 0.471332 2.36685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.826243 2.02917 0.566551 0.699652 0.470074

CAGE analysis