Hb_000513_070

Information

Type -
Description -
Location Contig513: 42472-45777
Sequence    

Annotation

kegg
ID rcu:RCOM_1095690
description kinase, putative (EC:2.7.11.30)
nr
ID XP_012081199.1
description PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
swissprot
ID Q9FNE1
description Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1
trembl
ID A0A067LA36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09565 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 42

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46388: 45058-45214
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000513_070 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
2 Hb_006452_090 0.1542051429 - - PREDICTED: eukaryotic translation initiation factor 5B [Jatropha curcas]
3 Hb_001247_200 0.1679625323 - - PREDICTED: clathrin coat assembly protein AP180 [Jatropha curcas]
4 Hb_048476_170 0.175522384 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II-like [Citrus sinensis]
5 Hb_002814_120 0.1764058444 - - PREDICTED: uncharacterized protein LOC105633463 [Jatropha curcas]
6 Hb_000384_030 0.1774230919 - - PREDICTED: uncharacterized protein LOC101310565 isoform X1 [Fragaria vesca subsp. vesca]
7 Hb_006816_170 0.1857154662 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
8 Hb_000504_090 0.1863617833 - - PREDICTED: titin isoform X10 [Jatropha curcas]
9 Hb_111985_080 0.1902863656 - - PREDICTED: pentatricopeptide repeat-containing protein At1g19720 [Jatropha curcas]
10 Hb_000832_130 0.1920896764 - - PREDICTED: pentatricopeptide repeat-containing protein At2g39620 [Jatropha curcas]
11 Hb_001136_090 0.1923517737 - - Protein PNS1, putative [Ricinus communis]
12 Hb_001912_080 0.1937633331 - - vacuolar protein sorting-associated protein, putative [Ricinus communis]
13 Hb_002217_150 0.1960506968 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
14 Hb_000883_030 0.1978646522 - - PREDICTED: uncharacterized protein LOC105636683 [Jatropha curcas]
15 Hb_000032_470 0.2009145108 - - PREDICTED: uncharacterized protein LOC103415826 [Malus domestica]
16 Hb_003236_010 0.2027765667 - - PREDICTED: uncharacterized protein LOC105635957 [Jatropha curcas]
17 Hb_002260_080 0.203137381 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
18 Hb_004117_100 0.2032138568 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
19 Hb_000069_320 0.2039479046 - - PREDICTED: uncharacterized protein LOC105642846 [Jatropha curcas]
20 Hb_126643_010 0.2046262753 - - Protein transport protein Sec24C, putative [Ricinus communis]

Gene co-expression network

sample Hb_000513_070 Hb_000513_070 Hb_006452_090 Hb_006452_090 Hb_000513_070--Hb_006452_090 Hb_001247_200 Hb_001247_200 Hb_000513_070--Hb_001247_200 Hb_048476_170 Hb_048476_170 Hb_000513_070--Hb_048476_170 Hb_002814_120 Hb_002814_120 Hb_000513_070--Hb_002814_120 Hb_000384_030 Hb_000384_030 Hb_000513_070--Hb_000384_030 Hb_006816_170 Hb_006816_170 Hb_000513_070--Hb_006816_170 Hb_002217_150 Hb_002217_150 Hb_006452_090--Hb_002217_150 Hb_000768_190 Hb_000768_190 Hb_006452_090--Hb_000768_190 Hb_003001_150 Hb_003001_150 Hb_006452_090--Hb_003001_150 Hb_126643_010 Hb_126643_010 Hb_006452_090--Hb_126643_010 Hb_002291_070 Hb_002291_070 Hb_006452_090--Hb_002291_070 Hb_064903_010 Hb_064903_010 Hb_006452_090--Hb_064903_010 Hb_001247_200--Hb_000384_030 Hb_001247_200--Hb_006816_170 Hb_000926_120 Hb_000926_120 Hb_001247_200--Hb_000926_120 Hb_001152_030 Hb_001152_030 Hb_001247_200--Hb_001152_030 Hb_000984_050 Hb_000984_050 Hb_001247_200--Hb_000984_050 Hb_058643_010 Hb_058643_010 Hb_001247_200--Hb_058643_010 Hb_002890_180 Hb_002890_180 Hb_048476_170--Hb_002890_180 Hb_004117_100 Hb_004117_100 Hb_048476_170--Hb_004117_100 Hb_001136_090 Hb_001136_090 Hb_048476_170--Hb_001136_090 Hb_000463_140 Hb_000463_140 Hb_048476_170--Hb_000463_140 Hb_000832_130 Hb_000832_130 Hb_048476_170--Hb_000832_130 Hb_007304_110 Hb_007304_110 Hb_048476_170--Hb_007304_110 Hb_003327_030 Hb_003327_030 Hb_002814_120--Hb_003327_030 Hb_001009_290 Hb_001009_290 Hb_002814_120--Hb_001009_290 Hb_000755_080 Hb_000755_080 Hb_002814_120--Hb_000755_080 Hb_011512_060 Hb_011512_060 Hb_002814_120--Hb_011512_060 Hb_012132_030 Hb_012132_030 Hb_002814_120--Hb_012132_030 Hb_002814_120--Hb_006452_090 Hb_001278_070 Hb_001278_070 Hb_000384_030--Hb_001278_070 Hb_000384_030--Hb_058643_010 Hb_000384_030--Hb_002217_150 Hb_000384_030--Hb_006816_170 Hb_009898_020 Hb_009898_020 Hb_000384_030--Hb_009898_020 Hb_002489_010 Hb_002489_010 Hb_006816_170--Hb_002489_010 Hb_002239_040 Hb_002239_040 Hb_006816_170--Hb_002239_040 Hb_034299_040 Hb_034299_040 Hb_006816_170--Hb_034299_040 Hb_002233_090 Hb_002233_090 Hb_006816_170--Hb_002233_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.36599 1.38596 0.317361 0.512264 5.46447 1.85017
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.368239 0.463615 1.60064 2.91771 2.06151

CAGE analysis