Hb_000445_450

Information

Type -
Description -
Location Contig445: 550462-551754
Sequence    

Annotation

kegg
ID rcu:RCOM_0559910
description Leucoanthocyanidin dioxygenase, putative (EC:1.14.11.19)
nr
ID XP_012078381.1
description PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
swissprot
ID O04274
description Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1
trembl
ID A0A067KKU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12192 PE=3 SV=1
Gene Ontology
ID GO:0046872
description leucoanthocyanidin dioxygenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000445_450 0.0 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
2 Hb_007520_040 0.0487257321 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
3 Hb_006355_030 0.1374435509 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
4 Hb_002876_310 0.1943595504 - - hypothetical protein JCGZ_03912 [Jatropha curcas]
5 Hb_002249_180 0.2124641557 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
6 Hb_000213_130 0.2132821505 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]
7 Hb_007072_020 0.2149193807 transcription factor TF Family: bHLH lMYC5 [Hevea brasiliensis]
8 Hb_000008_130 0.2162160813 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
9 Hb_000013_040 0.2162160813 - - -
10 Hb_000013_070 0.2162160813 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_000014_180 0.2162160813 - - PREDICTED: endo-1,4-beta-xylanase D-like [Fragaria vesca subsp. vesca]
12 Hb_000021_080 0.2162160813 - - -
13 Hb_000031_270 0.2162160813 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
14 Hb_000035_070 0.2162160813 - - PREDICTED: uncharacterized protein LOC104814513 [Tarenaya hassleriana]
15 Hb_000041_140 0.2162160813 - - -
16 Hb_000043_130 0.2162160813 - - -
17 Hb_000045_240 0.2162160813 - - -
18 Hb_000056_270 0.2162160813 - - Origin recognition complex subunit, putative [Ricinus communis]
19 Hb_000057_150 0.2162160813 - - hypothetical protein EUTSA_v10009202mg [Eutrema salsugineum]
20 Hb_000059_250 0.2162160813 - - PREDICTED: 40S ribosomal protein S8 [Jatropha curcas]

Gene co-expression network

sample Hb_000445_450 Hb_000445_450 Hb_007520_040 Hb_007520_040 Hb_000445_450--Hb_007520_040 Hb_006355_030 Hb_006355_030 Hb_000445_450--Hb_006355_030 Hb_002876_310 Hb_002876_310 Hb_000445_450--Hb_002876_310 Hb_002249_180 Hb_002249_180 Hb_000445_450--Hb_002249_180 Hb_000213_130 Hb_000213_130 Hb_000445_450--Hb_000213_130 Hb_007072_020 Hb_007072_020 Hb_000445_450--Hb_007072_020 Hb_007520_040--Hb_006355_030 Hb_000500_110 Hb_000500_110 Hb_007520_040--Hb_000500_110 Hb_003057_080 Hb_003057_080 Hb_007520_040--Hb_003057_080 Hb_007520_040--Hb_000213_130 Hb_007520_040--Hb_002876_310 Hb_006355_030--Hb_003057_080 Hb_006355_030--Hb_007072_020 Hb_002311_240 Hb_002311_240 Hb_006355_030--Hb_002311_240 Hb_006355_030--Hb_000500_110 Hb_002570_020 Hb_002570_020 Hb_002876_310--Hb_002570_020 Hb_002876_310--Hb_002249_180 Hb_001948_040 Hb_001948_040 Hb_002876_310--Hb_001948_040 Hb_004503_010 Hb_004503_010 Hb_002876_310--Hb_004503_010 Hb_000712_060 Hb_000712_060 Hb_002876_310--Hb_000712_060 Hb_009026_040 Hb_009026_040 Hb_002876_310--Hb_009026_040 Hb_000828_020 Hb_000828_020 Hb_002249_180--Hb_000828_020 Hb_002249_180--Hb_009026_040 Hb_002249_180--Hb_001948_040 Hb_003073_020 Hb_003073_020 Hb_002249_180--Hb_003073_020 Hb_039363_010 Hb_039363_010 Hb_002249_180--Hb_039363_010 Hb_004267_050 Hb_004267_050 Hb_002249_180--Hb_004267_050 Hb_012506_080 Hb_012506_080 Hb_000213_130--Hb_012506_080 Hb_000213_130--Hb_004267_050 Hb_022250_050 Hb_022250_050 Hb_000213_130--Hb_022250_050 Hb_001140_330 Hb_001140_330 Hb_000213_130--Hb_001140_330 Hb_005120_010 Hb_005120_010 Hb_000213_130--Hb_005120_010 Hb_001040_190 Hb_001040_190 Hb_000213_130--Hb_001040_190 Hb_000926_130 Hb_000926_130 Hb_007072_020--Hb_000926_130 Hb_007072_020--Hb_000500_110 Hb_000056_330 Hb_000056_330 Hb_007072_020--Hb_000056_330 Hb_007072_020--Hb_007520_040 Hb_007894_250 Hb_007894_250 Hb_007072_020--Hb_007894_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0412956 0 0.415464 0

CAGE analysis