Hb_000367_190

Information

Type -
Description -
Location Contig367: 165790-170605
Sequence    

Annotation

kegg
ID rcu:RCOM_1470550
description hypothetical protein
nr
ID XP_002514697.1
description hypothetical protein RCOM_1470550 [Ricinus communis]
swissprot
ID Q9BY12
description S phase cyclin A-associated protein in the endoplasmic reticulum OS=Homo sapiens GN=SCAPER PE=1 SV=2
trembl
ID B9RLS8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1470550 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_190 0.0 - - hypothetical protein RCOM_1470550 [Ricinus communis]
2 Hb_010174_060 0.1345402674 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
3 Hb_000260_810 0.1379949709 - - -
4 Hb_001021_130 0.1437209084 - - PREDICTED: uncharacterized protein LOC105642479 [Jatropha curcas]
5 Hb_000116_430 0.1448239715 - - PREDICTED: mitochondrial phosphate carrier protein 1, mitochondrial-like isoform X1 [Jatropha curcas]
6 Hb_074783_010 0.147243796 - - PREDICTED: uncharacterized protein LOC105649970 [Jatropha curcas]
7 Hb_001969_090 0.1500696966 - - plastid ATP/ADP transport protein 2 [Manihot esculenta]
8 Hb_002311_340 0.1574890218 - - phospholipase d zeta, putative [Ricinus communis]
9 Hb_001663_050 0.1589924755 - - PREDICTED: GPN-loop GTPase 3 [Jatropha curcas]
10 Hb_003647_060 0.1605024651 - - PREDICTED: uncharacterized protein LOC105646679 isoform X2 [Jatropha curcas]
11 Hb_012114_040 0.1642322016 - - DNA binding protein, putative [Ricinus communis]
12 Hb_000419_060 0.1646086542 - - PREDICTED: patatin-like protein 6 [Jatropha curcas]
13 Hb_000789_220 0.1656265545 - - phosphofructokinase [Hevea brasiliensis]
14 Hb_155764_010 0.1665152834 - - -
15 Hb_000367_260 0.1689449893 - - PREDICTED: uncharacterized protein LOC105640585 [Jatropha curcas]
16 Hb_000731_260 0.1691424626 - - hypothetical protein RCOM_0905090 [Ricinus communis]
17 Hb_003442_070 0.1691510805 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Jatropha curcas]
18 Hb_000362_120 0.1703005293 - - glutamate receptor 2 plant, putative [Ricinus communis]
19 Hb_000343_130 0.1706763392 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
20 Hb_000252_200 0.1712289697 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000367_190 Hb_000367_190 Hb_010174_060 Hb_010174_060 Hb_000367_190--Hb_010174_060 Hb_000260_810 Hb_000260_810 Hb_000367_190--Hb_000260_810 Hb_001021_130 Hb_001021_130 Hb_000367_190--Hb_001021_130 Hb_000116_430 Hb_000116_430 Hb_000367_190--Hb_000116_430 Hb_074783_010 Hb_074783_010 Hb_000367_190--Hb_074783_010 Hb_001969_090 Hb_001969_090 Hb_000367_190--Hb_001969_090 Hb_010174_060--Hb_001021_130 Hb_000069_600 Hb_000069_600 Hb_010174_060--Hb_000069_600 Hb_006615_020 Hb_006615_020 Hb_010174_060--Hb_006615_020 Hb_000789_220 Hb_000789_220 Hb_010174_060--Hb_000789_220 Hb_000010_460 Hb_000010_460 Hb_010174_060--Hb_000010_460 Hb_034406_030 Hb_034406_030 Hb_010174_060--Hb_034406_030 Hb_000696_310 Hb_000696_310 Hb_000260_810--Hb_000696_310 Hb_022181_020 Hb_022181_020 Hb_000260_810--Hb_022181_020 Hb_181600_010 Hb_181600_010 Hb_000260_810--Hb_181600_010 Hb_048476_050 Hb_048476_050 Hb_000260_810--Hb_048476_050 Hb_005183_120 Hb_005183_120 Hb_000260_810--Hb_005183_120 Hb_002301_230 Hb_002301_230 Hb_000260_810--Hb_002301_230 Hb_003647_060 Hb_003647_060 Hb_001021_130--Hb_003647_060 Hb_007508_090 Hb_007508_090 Hb_001021_130--Hb_007508_090 Hb_001021_130--Hb_074783_010 Hb_000189_560 Hb_000189_560 Hb_001021_130--Hb_000189_560 Hb_001021_130--Hb_001969_090 Hb_029888_010 Hb_029888_010 Hb_000116_430--Hb_029888_010 Hb_042202_030 Hb_042202_030 Hb_000116_430--Hb_042202_030 Hb_001414_030 Hb_001414_030 Hb_000116_430--Hb_001414_030 Hb_000020_120 Hb_000020_120 Hb_000116_430--Hb_000020_120 Hb_001511_070 Hb_001511_070 Hb_000116_430--Hb_001511_070 Hb_000856_150 Hb_000856_150 Hb_000116_430--Hb_000856_150 Hb_074783_010--Hb_003647_060 Hb_002577_010 Hb_002577_010 Hb_074783_010--Hb_002577_010 Hb_000592_020 Hb_000592_020 Hb_074783_010--Hb_000592_020 Hb_001053_090 Hb_001053_090 Hb_074783_010--Hb_001053_090 Hb_034688_020 Hb_034688_020 Hb_074783_010--Hb_034688_020 Hb_007747_200 Hb_007747_200 Hb_001969_090--Hb_007747_200 Hb_000317_280 Hb_000317_280 Hb_001969_090--Hb_000317_280 Hb_000575_150 Hb_000575_150 Hb_001969_090--Hb_000575_150 Hb_003687_240 Hb_003687_240 Hb_001969_090--Hb_003687_240 Hb_010883_090 Hb_010883_090 Hb_001969_090--Hb_010883_090 Hb_000805_020 Hb_000805_020 Hb_001969_090--Hb_000805_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.153009 0.108739 0.0535343 0.0641209 0.0174814 0.126499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.215862 0.159253 0.325307 0.269396 0.0907179

CAGE analysis