Hb_000009_540

Information

Type -
Description -
Location Contig9: 512347-512640
Sequence    

Annotation

kegg
ID rcu:RCOM_0603650
description hypothetical protein
nr
ID KDP31842.1
description hypothetical protein JCGZ_12303 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6W0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12303 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_540 0.0 - - hypothetical protein JCGZ_12303 [Jatropha curcas]
2 Hb_001754_140 0.2809143731 - - PREDICTED: uncharacterized protein LOC105643419 [Jatropha curcas]
3 Hb_001040_140 0.2867228289 - - -
4 Hb_006028_020 0.2874182797 - - PREDICTED: 60S ribosomal protein L38-like [Cicer arietinum]
5 Hb_178227_010 0.2932403284 - - Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis]
6 Hb_124055_010 0.2997892611 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
7 Hb_122239_010 0.3043405096 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
8 Hb_001842_030 0.3045677639 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
9 Hb_001102_100 0.304892963 - - PREDICTED: uncharacterized protein LOC105140429 isoform X2 [Populus euphratica]
10 Hb_001591_010 0.3063233711 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]
11 Hb_000212_210 0.3119602461 - - unnamed protein product [Coffea canephora]
12 Hb_024650_040 0.3137266055 - - PREDICTED: josephin-like protein [Jatropha curcas]
13 Hb_015807_140 0.3144830623 - - small heat-shock protein, putative [Ricinus communis]
14 Hb_002811_090 0.3201163147 - - 40S ribosomal protein S24A [Hevea brasiliensis]
15 Hb_001817_140 0.3219997172 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
16 Hb_000427_060 0.3230047216 - - -
17 Hb_004223_040 0.3230675784 - - PREDICTED: AP-2 complex subunit sigma [Fragaria vesca subsp. vesca]
18 Hb_132840_140 0.3236202643 - - PREDICTED: 60S acidic ribosomal protein P1 [Vitis vinifera]
19 Hb_012251_010 0.3238893937 - - -
20 Hb_003057_020 0.3240121562 - - 40S ribosomal protein S23, putative [Ricinus communis]

Gene co-expression network

sample Hb_000009_540 Hb_000009_540 Hb_001754_140 Hb_001754_140 Hb_000009_540--Hb_001754_140 Hb_001040_140 Hb_001040_140 Hb_000009_540--Hb_001040_140 Hb_006028_020 Hb_006028_020 Hb_000009_540--Hb_006028_020 Hb_178227_010 Hb_178227_010 Hb_000009_540--Hb_178227_010 Hb_124055_010 Hb_124055_010 Hb_000009_540--Hb_124055_010 Hb_122239_010 Hb_122239_010 Hb_000009_540--Hb_122239_010 Hb_007885_010 Hb_007885_010 Hb_001754_140--Hb_007885_010 Hb_003058_080 Hb_003058_080 Hb_001754_140--Hb_003058_080 Hb_000212_210 Hb_000212_210 Hb_001754_140--Hb_000212_210 Hb_001512_050 Hb_001512_050 Hb_001754_140--Hb_001512_050 Hb_001754_140--Hb_006028_020 Hb_000809_060 Hb_000809_060 Hb_001754_140--Hb_000809_060 Hb_132840_140 Hb_132840_140 Hb_001040_140--Hb_132840_140 Hb_001143_220 Hb_001143_220 Hb_001040_140--Hb_001143_220 Hb_000139_430 Hb_000139_430 Hb_001040_140--Hb_000139_430 Hb_005653_080 Hb_005653_080 Hb_001040_140--Hb_005653_080 Hb_001776_220 Hb_001776_220 Hb_001040_140--Hb_001776_220 Hb_001040_140--Hb_001512_050 Hb_002811_090 Hb_002811_090 Hb_006028_020--Hb_002811_090 Hb_027472_160 Hb_027472_160 Hb_006028_020--Hb_027472_160 Hb_006028_020--Hb_132840_140 Hb_001431_080 Hb_001431_080 Hb_006028_020--Hb_001431_080 Hb_006028_020--Hb_000139_430 Hb_002686_180 Hb_002686_180 Hb_006028_020--Hb_002686_180 Hb_000584_020 Hb_000584_020 Hb_178227_010--Hb_000584_020 Hb_002900_160 Hb_002900_160 Hb_178227_010--Hb_002900_160 Hb_014783_010 Hb_014783_010 Hb_178227_010--Hb_014783_010 Hb_007044_130 Hb_007044_130 Hb_178227_010--Hb_007044_130 Hb_002783_270 Hb_002783_270 Hb_178227_010--Hb_002783_270 Hb_009476_020 Hb_009476_020 Hb_178227_010--Hb_009476_020 Hb_097007_010 Hb_097007_010 Hb_124055_010--Hb_097007_010 Hb_004125_110 Hb_004125_110 Hb_124055_010--Hb_004125_110 Hb_000272_050 Hb_000272_050 Hb_124055_010--Hb_000272_050 Hb_021924_010 Hb_021924_010 Hb_124055_010--Hb_021924_010 Hb_001488_400 Hb_001488_400 Hb_124055_010--Hb_001488_400 Hb_000236_460 Hb_000236_460 Hb_124055_010--Hb_000236_460 Hb_012251_010 Hb_012251_010 Hb_122239_010--Hb_012251_010 Hb_003893_050 Hb_003893_050 Hb_122239_010--Hb_003893_050 Hb_002716_090 Hb_002716_090 Hb_122239_010--Hb_002716_090 Hb_000029_200 Hb_000029_200 Hb_122239_010--Hb_000029_200 Hb_000699_160 Hb_000699_160 Hb_122239_010--Hb_000699_160 Hb_003641_020 Hb_003641_020 Hb_122239_010--Hb_003641_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.6236 0.819449 10.0596 14.3416 1.7392 6.02931
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.75866 61.4956 5.67987 2.45573 0

CAGE analysis