Hb_150986_010

Information

Type -
Description -
Location Contig150986: 1509-3046
Sequence    

Annotation

kegg
ID rcu:RCOM_1321460
description hypothetical protein
nr
ID XP_002525693.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SI74
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1321460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150986_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001454_130 0.0810423443 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
3 Hb_011930_160 0.0815585276 - - PREDICTED: tetratricopeptide repeat protein 38-like [Jatropha curcas]
4 Hb_000300_050 0.0836290781 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000789_310 0.0880881919 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
6 Hb_000120_060 0.0891837029 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
7 Hb_103012_010 0.0899064373 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
8 Hb_002213_070 0.0909913939 - - epsilon-adaptin family protein [Populus trichocarpa]
9 Hb_003813_130 0.0913672118 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
10 Hb_001492_020 0.0925607632 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
11 Hb_000193_190 0.0930983224 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
12 Hb_001946_010 0.0938746748 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
13 Hb_005211_100 0.0938856994 - - PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Jatropha curcas]
14 Hb_004117_130 0.0946863394 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
15 Hb_000260_170 0.0949176515 - - PREDICTED: putative zinc transporter At3g08650 [Cucumis sativus]
16 Hb_003777_310 0.0951011142 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005054_100 0.0952910644 - - PREDICTED: uncharacterized protein At2g39920 [Jatropha curcas]
18 Hb_012022_090 0.0964235481 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
19 Hb_000608_320 0.0969356202 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
20 Hb_000212_240 0.0971909231 - - short-chain dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_150986_010 Hb_150986_010 Hb_001454_130 Hb_001454_130 Hb_150986_010--Hb_001454_130 Hb_011930_160 Hb_011930_160 Hb_150986_010--Hb_011930_160 Hb_000300_050 Hb_000300_050 Hb_150986_010--Hb_000300_050 Hb_000789_310 Hb_000789_310 Hb_150986_010--Hb_000789_310 Hb_000120_060 Hb_000120_060 Hb_150986_010--Hb_000120_060 Hb_103012_010 Hb_103012_010 Hb_150986_010--Hb_103012_010 Hb_000083_250 Hb_000083_250 Hb_001454_130--Hb_000083_250 Hb_000630_050 Hb_000630_050 Hb_001454_130--Hb_000630_050 Hb_145314_010 Hb_145314_010 Hb_001454_130--Hb_145314_010 Hb_000808_280 Hb_000808_280 Hb_001454_130--Hb_000808_280 Hb_106724_020 Hb_106724_020 Hb_001454_130--Hb_106724_020 Hb_003163_020 Hb_003163_020 Hb_011930_160--Hb_003163_020 Hb_001946_010 Hb_001946_010 Hb_011930_160--Hb_001946_010 Hb_004619_030 Hb_004619_030 Hb_011930_160--Hb_004619_030 Hb_003025_110 Hb_003025_110 Hb_011930_160--Hb_003025_110 Hb_000193_190 Hb_000193_190 Hb_011930_160--Hb_000193_190 Hb_011930_160--Hb_103012_010 Hb_007919_100 Hb_007919_100 Hb_000300_050--Hb_007919_100 Hb_000362_150 Hb_000362_150 Hb_000300_050--Hb_000362_150 Hb_005054_100 Hb_005054_100 Hb_000300_050--Hb_005054_100 Hb_001141_020 Hb_001141_020 Hb_000300_050--Hb_001141_020 Hb_152202_010 Hb_152202_010 Hb_000300_050--Hb_152202_010 Hb_007576_110 Hb_007576_110 Hb_000789_310--Hb_007576_110 Hb_000030_190 Hb_000030_190 Hb_000789_310--Hb_000030_190 Hb_033642_030 Hb_033642_030 Hb_000789_310--Hb_033642_030 Hb_000462_060 Hb_000462_060 Hb_000789_310--Hb_000462_060 Hb_000345_380 Hb_000345_380 Hb_000789_310--Hb_000345_380 Hb_001409_020 Hb_001409_020 Hb_000789_310--Hb_001409_020 Hb_003693_070 Hb_003693_070 Hb_000120_060--Hb_003693_070 Hb_000270_490 Hb_000270_490 Hb_000120_060--Hb_000270_490 Hb_010142_030 Hb_010142_030 Hb_000120_060--Hb_010142_030 Hb_000120_060--Hb_000808_280 Hb_001492_020 Hb_001492_020 Hb_000120_060--Hb_001492_020 Hb_002783_240 Hb_002783_240 Hb_000120_060--Hb_002783_240 Hb_103012_010--Hb_001946_010 Hb_000260_170 Hb_000260_170 Hb_103012_010--Hb_000260_170 Hb_000538_100 Hb_000538_100 Hb_103012_010--Hb_000538_100 Hb_007317_110 Hb_007317_110 Hb_103012_010--Hb_007317_110 Hb_103012_010--Hb_002783_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.38391 5.47841 4.17985 9.69942 11.6769 11.9024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.2558 3.87539 8.9129 7.58609 6.10336

CAGE analysis